Ythdf2 facilitates precursor miR-378/miR-378-5p maturation to support myogenic differentiation

Kaiping Deng1,2, Yalong Su1,2, Zhipeng Liu1,2

  • 1Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, 210095, China.

Insights

Ythdf2 protein regulates muscle cell differentiation by controlling the maturation of specific microRNAs (miRNAs) through an m6A-dependent mechanism, impacting myogenesis.

Area of Science:

  • Molecular Biology
  • Epigenetics
  • Cell Biology

Background:

  • Ythdf2 protein mediates mRNA degradation and influences skeletal muscle differentiation.
  • Ythdf2 interacts with m6A-modified precursor miRNAs, affecting their maturation.
  • The role of Ythdf2 in myogenesis via miRNA maturation remains unclear.

Purpose of the Study:

  • To investigate whether Ythdf2 regulates myogenesis by controlling miRNA maturation.
  • To identify specific miRNAs targeted by Ythdf2 during myogenic differentiation.
  • To elucidate the molecular mechanism linking Ythdf2, miRNA maturation, and myogenesis.

Main Methods:

  • Ythdf2 knockdown experiments in myoblasts.
  • miRNA and mRNA sequencing for integrated analysis.
  • Co-immunoprecipitation assays to study protein interactions.
  • Western blotting and qRT-PCR to assess protein and miRNA expression.

Main Results:

  • Ythdf2 knockdown suppressed myotube formation and altered miRNA expression.
  • miR-378 and miR-378-5p were identified as key Ythdf2 targets in myogenesis.
  • Ythdf2 facilitates pre-miR-378/miR-378-5p maturation by interacting with DICER1 and TARBP2.
  • Downregulation of miR-378/miR-378-5p inhibited myogenesis; their forced expression rescued Ythdf2 knockdown effects via the mTOR pathway.

Conclusions:

  • Ythdf2 regulates myogenic differentiation by mediating pre-miR-378/miR-378-5p maturation in an m6A-dependent manner.
  • This mechanism involves Ythdf2 interaction with the pre-miRNA processing complex.
  • The findings provide novel insights into m6A modification's role in myogenesis regulation.

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