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LRRK2 and RAB8A regulate cell death after lysosomal damage in macrophages through cholesterol-related pathways
Josefine Fussing Tengberg1, Francesco Russo2, Tau Benned-Jensen3
1Neuroscience, Molecular and Single Cell Pharmacology, H. Lundbeck A/S, Valby, 2500 Copenhagen, Denmark; Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, 2100 Copenhagen, Denmark.
Abstract:
Activating mutations in Leucine Rich Repeat Kinase 2 (LRRK2) are among the most common genetic causes of Parkinson's disease (PD). The mechanistic path from LRRK2 mutations to PD is not established, but several lines of data suggest that LRRK2 modulation of lysosomal function is involved. It has previously been shown that LRRK2 is recruited to lysosomes upon lysosomal damage leading to increased phosphorylation of its RAB GTPase substrates in macrophage-derived RAW 264.7 cells. Here, we find that LRRK2 kinase inhibition reduces cell death induced by the lysosomotropic compound LLOMe in RAW 264.7 cells showing that lysosomal damage and LRRK2 functionally interacts in both directions: lysosomal damage can lead to activation of LRRK2 signaling and LRRK2 inhibition can attenuate LLOMe-induced cell death. The effect is lysosome specific, as only lysosomal stressors and not a variety of other cell death inducers could be modulated by LRRK2 kinase inhibition. We show with timing and Lysotracker experiments that LRRK2 inhibition does not affect the immediate lysosomal permeabilization induced by LLOMe, but rather modulates the subsequent cellular response to lysosomal damage. siRNA-mediated knockdown of LRRK2 and its main substrates, the RAB GTPases, showed that LRRK2 and RAB8A knockdown could attenuate LLOMe-induced cell death, but not other RAB GTPases tested. An RNA sequencing study was done to identify downstream pathways modulated by LLOMe and LRRK2 inhibition. The most striking finding was that almost all cholesterol biosynthesis genes were strongly downregulated by LLOMe and upregulated with LRRK2 inhibition in combination with LLOMe treatment. To explore the functional relevance of the transcriptional changes, we pretreated cells with the NPC1 inhibitor U18666A that can lead to accumulation of lysosomal cholesterol. U18666A-treated cells were less sensitive to LLOMe-induced cell death, but the attenuation of cell death by LRRK2 inhibition was strongly reduced suggesting that LRRK2 inhibition and lysosomal cholesterol reduces cell death by overlapping mechanisms. Thus, our data demonstrates a LRRK2- and RAB8A-mediated attenuation of RAW 264.7 cell death induced by lysosomal damage that is modulated by lysosomal cholesterol.
Insights
Activating Leucine Rich Repeat Kinase 2 (LRRK2) mutations are linked to Parkinson's disease. This study shows LRRK2 inhibition and lysosomal cholesterol protect cells from lysosomal damage, revealing a novel therapeutic pathway.
Area of Science:
- Cell Biology
- Neuroscience
- Genetics
Background:
- Activating mutations in Leucine Rich Repeat Kinase 2 (LRRK2) are a common genetic cause of Parkinson's disease (PD).
- The precise mechanisms linking LRRK2 mutations to PD pathogenesis remain unclear, but evidence suggests a role for LRRK2 in modulating lysosomal function.
- Previous studies indicate LRRK2 is recruited to lysosomes during damage, increasing phosphorylation of RAB GTPase substrates.
Purpose of the Study:
- To investigate the functional interaction between lysosomal damage and LRRK2 signaling.
- To determine if LRRK2 kinase inhibition can protect against lysosomal stress-induced cell death.
- To elucidate downstream pathways affected by LLOMe-induced lysosomal damage and LRRK2 inhibition, focusing on cholesterol biosynthesis.
Main Methods:
- Utilized RAW 264.7 macrophage cells treated with the lysosomotropic compound LLOMe to induce lysosomal damage.
- Assessed cell death, lysosomal permeabilization (Lysotracker), and LRRK2 signaling pathway activity.
- Employed siRNA-mediated knockdown of LRRK2 and RAB GTPases, alongside RNA sequencing and cholesterol metabolism modulation (U18666A).
Main Results:
- LRRK2 kinase inhibition significantly reduced cell death induced by LLOMe, demonstrating a bidirectional interaction between lysosomal damage and LRRK2.
- LRRK2 inhibition specifically attenuated cell death caused by lysosomal stressors, not other cell death inducers, and modulated the cellular response post-permeabilization.
- Knockdown of LRRK2 and RAB8A, but not other RABs, attenuated LLOMe-induced cell death. RNA sequencing revealed downregulation of cholesterol biosynthesis genes by LLOMe, which was reversed by LRRK2 inhibition.
- Lysosomal cholesterol accumulation (via U18666A) reduced LLOMe-induced cell death, and this effect overlapped with LRRK2 inhibition, suggesting shared mechanisms.
Conclusions:
- This study demonstrates a LRRK2- and RAB8A-dependent mechanism that attenuates cell death following lysosomal damage in RAW 264.7 cells.
- Lysosomal cholesterol levels play a crucial role in modulating this protective pathway, indicating a link between LRRK2, lysosomal function, and lipid metabolism in cell survival.
- These findings offer new insights into Parkinson's disease pathogenesis and suggest potential therapeutic strategies targeting LRRK2 and lysosomal cholesterol homeostasis.
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