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Published on: May 15, 2020
Importance of variables from different time frames for predicting self-harm using health system data
Charles J Wolock1, Brian D Williamson2, Susan M Shortreed2
1Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, 423 Guardian Dr., Philadelphia, PA, 19104, USA.
Recent mental health data (within three months) is crucial for predicting self-harm risk. Distant historical data is less predictive, impacting clinical implementation of risk models.
Area of Science:
- Biomedical Informatics
- Clinical Informatics
- Health Services Research
Background:
- Self-harm risk prediction models often utilize historical patient data spanning several years.
- Data availability across different time periods can be inconsistent for all patients.
- Algorithm-agnostic variable importance provides a framework to assess predictive potential across various time horizons.
Purpose of the Study:
- To evaluate the predictive potential of patient mental health information from different time horizons (recent vs. distant) for self-harm risk.
- To demonstrate the application of variable importance techniques in a biomedical informatics context for risk prediction.
- To understand how data availability at different time frames impacts model implementation.
Main Methods:
- Utilized variable importance to quantify the predictive power of recent (≤3 months) and distant (>1 year) mental health data.
- Assessed importance by measuring the decrease in predictiveness when specific variable sets were excluded.
- Employed discriminative metrics including area under the receiver operating characteristic curve (AUC), sensitivity, and positive predictive value.
Main Results:
- Mental health predictors from the three months preceding the index visit demonstrated significant importance.
- Excluding recent predictors reduced the area under the receiver operating characteristic curve (AUC) from 0.85 to 0.77 in one setting.
- Predictors from more distant time frames showed comparatively lower importance.
Conclusions:
- Recent mental health indicators are highly important for accurate self-harm risk prediction.
- Challenges in implementing self-harm prediction models may arise in settings with incomplete recent data due to processing lags.
- Variable importance analysis is valuable for guiding the clinical implementation of risk prediction models amidst data limitations and can be broadly applied in biomedical informatics.
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