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Updated: Jun 7, 2025

Analyzing Protein Architectures and Protein-Ligand Complexes by Integrative Structural Mass Spectrometry
Published on: October 15, 2018
Structure and Stabilities of Solution and Gas Phase Protein Complexes
Robert L Rider1, Carter Lantz1, Liqi Fan1
1Department of Chemistry Texas A&M University College Station, Texas 77843, United States.
Collision-induced unfolding (CIU) and variable-temperature electrospray ionization (vT-ESI) reveal how protein structures persist without solvent. These methods probe protein stability and the impact of water and metal ions on gas-phase structures.
Area of Science:
- Biophysical Chemistry
- Mass Spectrometry
- Structural Biology
Background:
- Collision-induced unfolding (CIU) and variable-temperature electrospray ionization (vT-ESI) are key techniques for studying gas-phase protein ions.
- Understanding the persistence of solution structures in the gas phase is crucial for interpreting mass spectrometry data.
Purpose of the Study:
- To investigate the stability and structural retention of proteins and protein complexes in the gas phase after electrospray ionization.
- To explore the influence of water removal and cofactors on protein structure and stability using CIU and vT-ESI.
- To address fundamental questions about how long and to what extent solution structures are maintained without solvent.
Main Methods:
- Employing variable-temperature electrospray ionization (vT-ESI) coupled with ion mobility-mass spectrometry (IM-MS).
- Utilizing collision-induced unfolding (CIU) to probe gas-phase ion stability.
- Analyzing apo- and metalated-metallothionein-2A (MT) and transthyretin (TTR) proteoforms.
Main Results:
- CIU and vT-ESI provide complementary data on the stability of gas-phase versus solution-phase ions.
- The study examined distinct features of CIU and TIU across different protein complexes, including MT and TTR.
- Results highlight the significant effects of water and metal ions on protein structure and stability.
Conclusions:
- CIU and vT-ESI are powerful tools for probing the energy landscape of native proteins.
- The findings shed light on the structural dynamics and stability of proteins and protein complexes in the transition from solution to gas phase.
- This work advances our understanding of how solution structures are retained in the absence of solvent.
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