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Published on: September 1, 2019
A novel RUNX2 splice site mutation in Chinese associated with cleidocranial dysplasia
Jing Wang1, Qiuying Li1, Hongyu Li2
1Department of Orthodontics, School of Stomatology, Beijing Stomatological Hospital, Capital Medical University, No.4 Tiantan Xili, Dong cheng District, Beijing, 100050, China.
Abstract:
Pathogenic genes in most patients with cleidocranial dysplasia have been confirmed to be runt-related transcription factor 2 (RUNX2), which controls mutations in specific osteoblast transcription factors and affects skull ossification and suture adhesion. This study aimed to explore the role of RUNX2 mutations. Here, we report a rare case of a splice site mutation in a Chinese population with typical cleidocranial dysplasia symptoms, cranial suture insufficiency, clavicle dysplasia, and dental anomalies. Peripheral blood samples from the proband and her mother were subjected to Sanger sequencing. The expression levels of RUNX2 before and after mutation were verified using digital PCR (dPCR). The results revealed a classic mutation at the fifth base of the intron 5 initiation splicing sequence (NM001024630.4: C.685+5G > A). The mutation rate in the proband was 53 %, while the mother did not have any mutations. The secondary RNA structure of the RUNX2 gene in the progenitor was predicted to change, and the structural free energy was low in the wild-type, with the stem folded first and the structure being relatively stable. After the mutation, the free energy increased. This finding enriches the RUNX2 mutation library of CD-related genes in Chinese individuals.
Insights
This study identifies a rare RUNX2 splice site mutation in a Chinese patient with cleidocranial dysplasia. The findings expand the known RUNX2 mutation spectrum for this genetic disorder.
Area of Science:
- Genetics
- Molecular Biology
- Developmental Biology
Background:
- Cleidocranial dysplasia (CCD) is primarily caused by mutations in the RUNX2 gene.
- RUNX2 is crucial for osteoblast differentiation and regulates bone development, including skull ossification and suture fusion.
Purpose of the Study:
- To investigate the role of RUNX2 mutations in a Chinese patient presenting with typical CCD symptoms.
- To characterize a novel splice site mutation in the RUNX2 gene.
Main Methods:
- Sanger sequencing was performed on peripheral blood samples from the proband and her mother.
- Digital PCR (dPCR) was utilized to quantify RUNX2 expression levels.
- RNA secondary structure prediction was employed to assess the impact of the mutation.
Main Results:
- A novel splice site mutation (C.685+5G>A) in intron 5 of the RUNX2 gene was identified in the proband.
- The mutation rate in the proband was 53%, while her mother was unaffected.
- The mutation altered the predicted secondary RNA structure of RUNX2, increasing free energy and decreasing stability.
Conclusions:
- This case report documents a rare RUNX2 splice site mutation in a Chinese population with CCD.
- The findings contribute to the understanding of RUNX2 mutation diversity and its role in CCD pathogenesis.
- This discovery enriches the RUNX2 mutation database for CCD-related genes in Chinese individuals.
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