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The Effect of Micro-Computed Tomography Thresholding Methods on Bone Micromorphometric Analysis
Arda Buyuksungur1, Bence Tamás Szabó2, Adrienn Dobai2
1Department of Basic Medical Sciences, Ankara University, 06100 Ankara, Türkiye.
Journal of Functional Biomaterials
|November 26, 2024
Summary
Comparing micro CT thresholding methods for mouse bone analysis reveals varying agreement. Connectivity and trabecular thickness showed good agreement, aiding bone micromorphometric parameter standardization.
Area of Science:
- Biomedical Engineering
- Orthopedics
- Radiology
Background:
- Micro computed tomography (micro CT) is crucial for analyzing bone micromorphometric parameters in 2D and 3D.
- These parameters are vital for studies on new bone formation, tissue engineering, and biomaterials.
- Image segmentation using different threshold methods can yield inconsistent results in bone analysis.
Purpose of the Study:
- To compare the efficacy of various thresholding methods for analyzing bone micromorphometric parameters in mouse tibia.
- To evaluate the agreement between different thresholding techniques in micro CT image segmentation.
- To identify the most reliable thresholding methods for consistent quantification of mouse bone structure.
Main Methods:
- Utilized a dataset of 15 mouse tibiae for micro CT analysis.
- Applied multiple thresholding methods for image segmentation of the bone structures.
- Quantified key bone micromorphometric parameters including bone volume, trabecular number, connectivity, and separation using CTAn software.
Main Results:
- All tested threshold methods showed some level of agreement for bone micromorphometric analyses.
- Good agreement was observed for connectivity and trabecular thickness parameters across different methods.
- Limited agreement was found for other parameters such as bone volume and trabecular separation.
Conclusions:
- The choice of thresholding method significantly impacts the quantification of mouse tibia micromorphometric parameters.
- Connectivity and trabecular thickness are relatively robust parameters across different segmentation methods.
- Standardizing thresholding methods is essential for reliable and comparable bone analysis across research groups.

