Related Experiment Video
Updated: Jun 6, 2025

Early Detection of Cyanobacterial Blooms and Associated Cyanotoxins using Fast Detection Strategy
Published on: February 25, 2021
Characterization of Phytoplankton Composition in Lake Maggiore: Integrated Chemotaxonomy for Enhanced Cyanobacteria
Elisabetta Canuti1, Martina Austoni2
1European Commission, Joint Research Centre (JRC), 21027 Ispra, VA, Italy.
Abstract:
Cyanobacterial blooms in lakes have increased in frequency and intensity over the past two decades, negatively affecting ecological and biogeochemical processes. This study focuses on the phytoplankton composition of Lake Maggiore, with a special emphasis on cyanobacteria detection through pigment composition. While microscopy is the standard method for phytoplankton identification, pigment-based methods provide broader spatiotemporal coverage. Between May and September 2023, five measurement campaigns were conducted in Lake Maggiore, collecting bio-geochemical and bio-optical data at 27 stations. The total Chlorophyll-a (TChl a) was measured, with concentrations ranging from 1.13 to 6.9 mg/m3. Phytoplankton pigment composition was analyzed using High-Performance Liquid Chromatography (HPLC) and the CHEMTAX approach was applied for phytoplankton classification. The results were cross-validated using Principal Component Analysis (PCA), Hierarchical Cluster Analysis (HCA), and microscopic counts. Cyanobacteria were identified based on unique pigment markers, such as carotenoids. The HPLC-derived pigment classification results aligned well with both PCA and HCA and microscopic counts verified the accuracy of the pigment-based chemotaxonomy. The study demonstrates that pigment-based classification methods, when combined with statistical analyses, offer a reliable alternative for identifying cyanobacteria and other phytoplankton groups, with potential applications in support of remote sensing algorithm development.
More Related Videos
10:57Experimental Protocol for Detecting Cyanobacteria in Liquid and Solid Samples with an Antibody Microarray Chip
Published on: February 7, 2017
08:09An Aquatic Microbial Metaproteomics Workflow: From Cells to Tryptic Peptides Suitable for Tandem Mass Spectrometry-based Analysis
Published on: September 15, 2015
Related Concept Videos
Bacterial Phylum Cyanobacteria
Anoxygenic Phototrophic Bacteria