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FST and genetic diversity in an island model with background selection.
Asad Hasan1, Michael C Whitlock1
1Department of Zoology, University of British Columbia, Vancouver, British Columbia, Canada.
Plos Genetics
|December 2, 2024
Summary
Background selection impacts genetic diversity (πT) and differentiation (FST) in structured populations. High migration rates minimize FST increases from background selection, but substantial πT reductions persist, especially in large metapopulations.
Area of Science:
- Evolutionary genetics
- Population genetics theory
Background:
- Background selection reduces genetic diversity at linked neutral sites.
- Theory currently quantifies effects only for deleterious alleles under strong selection.
- Migration's impact on background selection's effect on FST remains unclear.
Purpose of the Study:
- To derive novel theory for migration's effects on background selection in subpopulations.
- To extend existing theory for interference selection into structured populations.
- To predict effects on neutral diversity (πT) and genetic differentiation (FST) in an island model.
Main Methods:
- Derivation of novel population genetics theory.
- Extension of existing interference selection theory.
- Simulations to test theoretical predictions against FST and πT.
Main Results:
- The derived theory accurately predicts FST and πT.
- High migration rates lead to minimal increases in FST due to reduced correlated fitness effects.
- Background selection substantially reduces πT, particularly in large metapopulations.
Conclusions:
- Novel theory extends background selection into structured populations.
- Background selection minimally confounds locus-to-locus FST scans under high migration.
- Understanding background selection is crucial for interpreting population genetic data.
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