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Crystal structure predictions for molecules with soft degrees of freedom using intermonomer force fields derived from
Rahul Nikhar1, Rafał Podeszwa2, Atta U Rehman1
1Department of Physics and Astronomy, University of Delaware, Newark, DE 19716, USA.
A new crystal structure prediction (CSP) protocol effectively models flexible molecules using an ab initio force field. This approach shows promise for predicting crystal structures, especially for flexible monomers, and aids in molecular dynamics simulations.
Area of Science:
- Computational Chemistry
- Crystallography
- Materials Science
Background:
- Crystal structure prediction (CSP) is crucial for understanding material properties.
- Previous CSP methods faced challenges with flexible molecules and complex crystal systems (e.g., salts, cocrystals).
- The seventh blind test provided diverse and challenging targets to evaluate CSP protocols.
Purpose of the Study:
- To present and evaluate a novel molecular crystal structure prediction (CSP) protocol.
- To assess the protocol's performance on diverse targets, including flexible monomers, salts, and cocrystals.
- To investigate the utility of an ab initio force field (aiFF) for CSP.
Main Methods:
- Developed an ab initio two-body rigid-monomer six-dimensional force field (aiFF) for global-minimum conformers.
- Employed a CSP protocol involving conformational searching, packing, and lattice-energy minimization.
- Utilized flexible-monomer CSPs and empirical/reparametrized intramolecular force fields (FFs) for specific targets.
Main Results:
- Achieved success rates of 54% in structure generation and 89% in structure rating in the post-submission phase.
- Demonstrated the protocol's effectiveness for crystals containing flexible monomers.
- Highlighted the potential of the conformer-based approach with rigid-monomer CSPs.
Conclusions:
- The presented conformer-based CSP protocol, utilizing ab initio force fields, is recommended for crystals with flexible monomers.
- The protocol's reliance on first-principles quantum mechanics enables tailor-made force fields for molecular dynamics simulations.
- Further development is needed for empirical intramolecular force fields reparametrized with ab initio data for optimal CSP performance.
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