Drug repurposing opportunities for breast cancer and seven common subtypes

Yilong Lin1, Songsong Wang2, Yun Zhang3

  • 1Department of Breast Surgery, the First Affiliated Hospital of Xiamen University, School of Medicine, Xiamen University, Xiamen, China; School of Medicine, Xiamen University, Xiamen, China.

Insights

Drug repurposing identified key genes for breast cancer subtypes. OPRL1 is a prioritized target for overall and Luminal A breast cancer, while FES and FAAH are targets for ER+ breast cancer.

Area of Science:

  • Oncology
  • Genetics
  • Pharmacology

Background:

  • Breast cancer poses a significant global health challenge.
  • Drug repurposing offers a promising avenue for developing novel therapeutics.
  • Identifying druggable targets is crucial for advancing breast cancer treatment.

Purpose of the Study:

  • To identify actionable, druggable genes associated with various breast cancer subtypes using Mendelian randomization.
  • To pinpoint prioritized therapeutic targets for overall, ER-positive, ER-negative, and intrinsic breast cancer subtypes.
  • To explore drug repurposing opportunities for identified targets, including molecular docking and cell-based assays.

Main Methods:

  • Mendelian randomization (MR) analysis to identify genetic associations with breast cancer.
  • Colocalization analysis to prioritize genetic targets.
  • Molecular docking simulations to evaluate drug-target interactions.
  • CCK-8 assays to assess drug sensitivity in different breast cancer cell groups.

Main Results:

  • Identified 26 genes for overall breast cancer, 25 for ER+ breast cancer, and 4 for ER- breast cancer.
  • Discovered actionable druggable genes for intrinsic subtypes: Luminal A (29), Luminal B (2), Luminal B HER2 negative (1), and triple-negative (3).
  • Prioritized OPRL1 for overall and Luminal A breast cancer; FES and FAAH for ER+ breast cancer. Crizotinib emerged as a potential repurposed drug for FES targets.

Conclusions:

  • OPRL1 is a key prioritized target for both overall and Luminal A breast cancer.
  • FES and FAAH are identified as prioritized targets for ER+ breast cancer.
  • Drug repurposing, exemplified by crizotinib for FES, shows potential for novel breast cancer therapeutics.