Interferon response and epigenetic modulation by SMARCA4 mutations drive ovarian tumor immunogenicity

Melica Nourmoussavi Brodeur1, Higinio Dopeso1, Yingjie Zhu1

  • 1Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Science Advances
|December 4, 2024
PubMed

Insights

Loss of SMARCA4 (BRG1) in ovarian cancer boosts tumor immunogenicity by upregulating immune response genes and antigen presentation. This enhances T cell and NK cell activity, suggesting SMARCA4 targeting as an immunotherapy strategy.

Area of Science:

  • Oncology
  • Immunology
  • Genetics

Background:

  • Ovarian cancer (OC) immunogenicity mechanisms are poorly understood.
  • SWI/SNF chromatin remodeling complex mutations, particularly in SMARCA4 (BRG1), correlate with better immune checkpoint blockade response.
  • The underlying mechanisms linking SMARCA4 loss to improved immunotherapy outcomes remain unclear.

Purpose of the Study:

  • To elucidate the cell-intrinsic mechanisms by which SMARCA4 loss influences ovarian cancer immunogenicity.
  • To investigate the role of SMARCA4 in regulating anti-tumor immunity.
  • To explore the potential of targeting SMARCA4 as a therapeutic strategy for ovarian cancer.

Main Methods:

  • Utilized ovarian cancer models with SMARCA4 loss.
  • Analyzed changes in cancer cell-intrinsic immunogenicity, including LTRU, ISGs, and antigen presentation machinery.
  • Investigated the involvement of STING, MAVS, IRF3, and type I interferon receptor signaling pathways.
  • Assessed immune cell infiltration and activation in mouse ovarian and melanoma tumors with SMARCA4 loss.
  • Evaluated the effects of BRG1 inhibitor treatment in SMARCA4-proficient tumor models.

Main Results:

  • SMARCA4 loss in ovarian cancer models increased cell-intrinsic immunogenicity.
  • This included upregulation of long-terminal RNA repeats, interferon-stimulated genes, and antigen presentation machinery.
  • The observed immunogenicity was dependent on STING, MAVS, and IRF3 signaling, but not the type I interferon receptor.
  • Tumors with SMARCA4 loss exhibited increased infiltration and activation of cytotoxic T cells, NK cells, and myeloid cells.
  • BRG1 inhibitor treatment recapitulated these findings in SMARCA4-proficient tumors.

Conclusions:

  • SMARCA4 loss enhances ovarian cancer immunogenicity through intrinsic cellular mechanisms involving STING-MAVS-IRF3 signaling.
  • Targeting SMARCA4 can promote anti-tumor immune responses, including increased cytotoxic T cell and NK cell activity.
  • Modulating chromatin remodeling by targeting SMARCA4 represents a promising strategy to overcome immune evasion in ovarian cancer.

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