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Updated: Jun 5, 2025

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Direct Restart of a Replication Fork Stalled by a Head-On RNA Polymerase
Published on: April 29, 2010
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TTF2 promotes replisome eviction from stalled forks in mitosis
Geylani Can1,2,3, Maksym Shyian3, Archana Krishnamoorthy1,2
1Department of Cell Biology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.
Biorxiv : the Preprint Server for Biology
|December 9, 2024
Summary
Mitotic cells with unreplicated DNA face genome instability. TRAIP, phosphorylated by Cyclin B-CDK1 and tethered by TTF2, disassembles stalled DNA replisomes, ensuring chromosome stability.
Area of Science:
- Cellular biology
- Molecular genetics
- DNA replication and repair
Background:
- Under-replicated DNA during mitosis compromises sister chromosome segregation, leading to genome instability.
- The E3 ubiquitin ligase TRAIP ubiquitylates the CMG helicase to disassemble stalled replisomes, cleave forks, and restore chromosome structure.
Purpose of the Study:
- To elucidate the molecular mechanisms by which TRAIP mediates replisome disassembly in mitosis.
- To investigate the roles of Cyclin B-CDK1 kinase and TTF2 in TRAIP-mediated replisome regulation.
Main Methods:
- Phosphorylation assays to determine TRAIP modification by Cyclin B-CDK1.
- Co-immunoprecipitation and biochemical assays to analyze protein-protein interactions (TRAIP, TTF2, CMG, DNA polymerase ε).
- Assessment of replisome disassembly, fork cleavage, and RNAPII eviction in cells with modified TRAIP and TTF2.
Main Results:
- TRAIP phosphorylation by Cyclin B-CDK1 is essential for replisome disassembly.
- TTF2 acts as a scaffold, tethering phosphorylated TRAIP to the CMG helicase and DNA polymerase ε via its N-terminal zinc finger and an adjacent peptide.
- This TRAIP-TTF2-pol ε complex facilitates CMG unloading and stalled fork breakage, while TTF2's ATPase activity is required for RNAPII eviction.
Conclusions:
- Mitotic replisome disassembly is a regulated process involving TRAIP phosphorylation and the scaffolding function of TTF2.
- A novel TRAIP-TTF2-pol ε bridge is critical for resolving under-replicated DNA and maintaining genome stability.
- TTF2 plays dual roles in mitosis, coordinating replisome disassembly and RNAPII eviction through distinct mechanisms.
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