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Updated: Jun 5, 2025

Visualizing and Quantifying Endonuclease-Based Site-Specific DNA Damage
Published on: August 21, 2021
Transcription factors, nucleotide excision repair, and cancer: A review of molecular interplay
Perihan Yagmur Guneri-Sozeri1, Ogün Adebali1
1Faculty of Engineering and Natural Sciences, Sabancı University, Istanbul 34956, Türkiye.
Abstract:
Bulky DNA adducts are mostly formed by external factors such as UV irradiation, smoking or treatment with DNA crosslinking agents. If such DNA adducts are not removed by nucleotide excision repair, they can lead to formation of driver mutations that contribute to cancer formation. Transcription factors (TFs) may critically affect both DNA adduct formation and repair efficiency at the binding site to DNA. For example, "hotspot" mutations in melanoma coincide with UV-induced accumulated cyclobutane pyrimidine dimer (CPD) adducts and/or inhibited repair at the binding sites of some TFs. Similarly, anticancer treatment with DNA cross-linkers may additionally generate DNA adducts leading to secondary mutations and the formation of malignant subclones. In addition, some TFs are overexpressed in response to UV irradiation or chemotherapeutic treatment, activating oncogenic and anti-oncogenic pathways independently of nucleotide excision repair itself. This review focuses on the interplay between TFs and nucleotide excision repair during cancer development and progression.
Insights
External factors create DNA adducts, potentially causing cancer if not repaired. Transcription factors influence DNA adduct formation and repair, impacting cancer development and progression.
Area of Science:
- Molecular Biology
- Genetics
- Cancer Research
Background:
- Bulky DNA adducts, often from external sources like UV radiation and smoking, can lead to cancer-driving mutations if not repaired by nucleotide excision repair (NER).
- Transcription factors (TFs) play a crucial role in modulating DNA adduct formation and NER efficiency at their binding sites.
- TF binding sites can become mutation hotspots, as seen with UV-induced cyclobutane pyrimidine dimers (CPDs) in melanoma, linked to inhibited repair.
Purpose of the Study:
- To review the complex interplay between transcription factors (TFs) and nucleotide excision repair (NER) in the context of cancer development and progression.
- To highlight how TFs influence DNA adduct formation, repair dynamics, and subsequent mutation accumulation.
- To explore the dual role of TFs in regulating oncogenic and anti-oncogenic pathways, independent of NER.
Main Methods:
- Literature review focusing on the molecular mechanisms of DNA adduct formation and repair.
- Analysis of studies investigating the role of transcription factors in DNA damage response pathways.
- Examination of research on TF binding site characteristics and their association with mutation hotspots in cancer.
Main Results:
- Transcription factors can significantly impact the formation and repair of DNA adducts at their binding sites.
- TF overexpression in response to DNA damaging agents can activate signaling pathways relevant to cancer.
- Specific TF binding sites are associated with increased susceptibility to mutations, contributing to cancer initiation and progression.
Conclusions:
- The interaction between transcription factors and nucleotide excision repair is a critical determinant in cancer development.
- Understanding these interactions offers potential targets for cancer prevention and therapy.
- TFs represent key regulators in the DNA damage response, influencing both mutation susceptibility and cellular signaling in cancer.
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