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CRISPR/Cas9-Based Protocol for Precise Genome Editing in Induced Pluripotent Stem Cells
Avinash Singh1,2, Swathy Babu1,2, Marcus Phan1,3
1Department of Neurology, University of Minnesota, Twin Cities, Minneapolis, MN, USA.
Bio-Protocol
|December 30, 2024
Summary
Enhance CRISPR genome editing in human induced pluripotent stem cells (iPSCs) by inhibiting p53 and using pro-survival molecules. This method boosts cell survival and achieves over 90% homologous recombination efficiency.
Area of Science:
- Molecular Biology
- Stem Cell Biology
- Genetic Engineering
Background:
- CRISPR/Cas9 technology offers powerful genome editing capabilities.
- Editing human induced pluripotent stem cells (iPSCs) with CRISPR faces challenges in cell survival and efficiency.
- P53 activation during CRISPR editing can induce apoptosis, hindering success.
Purpose of the Study:
- To develop a protocol to enhance cell survival and editing efficiency in human iPSCs using CRISPR.
- To mitigate the apoptotic response triggered by CRISPR editing.
- To streamline the creation of isogenic cell lines.
Main Methods:
- Combining p53 inhibition with pro-survival small molecules during CRISPR editing.
- Utilizing CRISPR/Cas9 technology for targeted genome modification in human iPSCs.
- Assessing homologous recombination rates and cell survival post-editing.
Main Results:
- A novel protocol combining p53 inhibition and pro-survival molecules significantly enhances cell survival.
- Achieved a homologous recombination rate exceeding 90% in human iPSCs.
- Reduced the overall time for iPSC genome editing to as little as 8 weeks.
Conclusions:
- The combination of p53 inhibition and pro-survival molecules is an effective strategy for improving CRISPR editing outcomes in iPSCs.
- This optimized protocol accelerates the generation of genetically modified iPSCs.
- The findings facilitate the efficient creation of isogenic cell lines for research and therapeutic applications.
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