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Updated: Jun 4, 2025

Author Spotlight: High-Throughput Image-Based Quantification of Mitochondrial DNA Synthesis and Distribution
Published on: May 5, 2023
Mitochondria-Nucleus Migration Probe for Ultrasensitive Monitoring of mtDNA Damage in Living Cells
Zhen-Qing Yu1, Wenjing Pan1, Xiaofeng Yang1
1School of Chemistry and Chemical Engineering University of Jinan, Jinan 250022, People's Republic of China.
Abstract:
Mitochondrial DNA (mtDNA) damage is a prevalent phenomenon that has been proven to be implicated in a wide spectrum of diseases. However, the progressive attenuation of probe signals in response to mtDNA damage within living cells inherently limits the sensitivity and precision of current probes for detecting mtDNA damage. Herein, we employ an innovative organelle signal ratio imaging approach, utilizing the mitochondria-nucleus migration probe MCQ, to achieve unparalleled sensitivity in detecting mtDNA damage in living cells. MCQ exhibited an initial preferential binding to mtDNA, facilitated by its cationic quinolinium moiety, but migrated to the nucleus upon mtDNA damage. This unique migration behavior not only enhanced the spatial identifiability of mtDNA damage but also amplified detection sensitivity and precision significantly by harnessing the intensified nucleus signal against the attenuated mitochondrial signal. This innovative approach established a positive correlation between the signal and mtDNA damage, enabling the detection of even subtle mtDNA damage at the early stage of apoptosis with a remarkable 23-fold enhancement following just 5 min H2O2 induction in living cells, whereas conventional methods relying solely on the fading of mitochondrial signals proved insufficient. Furthermore, MCQ's ability to monitor the occurrence of mtDNA damage achieved the intricate differentiation between apoptosis and ferroptosis. By monitoring mtDNA damage, drug-induced apoptosis in cancer cells was further conducted using MCQ to evaluate the therapeutic efficacy of four anticancer drugs at very low concentrations. This innovative strategy not only paves the way for ultrasensitive detection of mtDNA damage but also holds immense promise for early monitoring of mtDNA damage-associated diseases.
Insights
This study introduces a novel probe (MCQ) for highly sensitive detection of mitochondrial DNA (mtDNA) damage in living cells. The probe
Area of Science:
- Biochemistry
- Cell Biology
- Molecular Biology
Background:
- Mitochondrial DNA (mtDNA) damage is linked to numerous diseases.
- Current detection methods for mtDNA damage in living cells lack sensitivity and precision due to signal attenuation.
Purpose of the Study:
- To develop a highly sensitive and precise method for detecting mtDNA damage in living cells.
- To utilize an organelle signal ratio imaging approach with a mitochondria-nucleus migration probe.
Main Methods:
- Developed and utilized the mitochondria-nucleus migration probe MCQ.
- Employed an organelle signal ratio imaging approach.
- Observed MCQ's preferential binding to mtDNA and subsequent migration to the nucleus upon damage.
Main Results:
- MCQ demonstrated significantly enhanced sensitivity and precision in detecting mtDNA damage.
- A positive correlation between MCQ signal and mtDNA damage was established.
- Subtle mtDNA damage was detected at early apoptosis stages with a 23-fold enhancement.
- MCQ differentiated between apoptosis and ferroptosis and evaluated drug efficacy in cancer cells.
Conclusions:
- The novel MCQ probe and imaging strategy enable ultrasensitive detection of mtDNA damage.
- This approach holds promise for early monitoring of mtDNA damage-associated diseases.
- MCQ facilitates differentiation of cell death pathways and drug efficacy assessment.

