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Targeting chromosomally unstable tumors with a selective KIF18A inhibitor
Aaron F Phillips1, Rumin Zhang1, Mia Jaffe1
1Volastra Therapeutics, New York, NY, USA.
Abstract:
Chromosome instability is a prevalent vulnerability of cancer cells that has yet to be fully exploited therapeutically. To identify genes uniquely essential to chromosomally unstable cells, we mined the Cancer Dependency Map for genes essential in tumor cells with high levels of copy number aberrations. We identify and validate KIF18A, a mitotic kinesin, as a vulnerability of chromosomally unstable cancer cells. Knockdown of KIF18A leads to mitotic defects and reduction of tumor growth. Screening of a chemical library for inhibitors of KIF18A enzymatic activity identified a hit that was optimized to yield VLS-1272, which is orally bioavailable, potent, ATP non-competitive, microtubule-dependent, and highly selective for KIF18A versus other kinesins. Inhibition of KIF18A's ATPase activity prevents KIF18A translocation across the mitotic spindle, resulting in chromosome congression defects, mitotic cell accumulation, and cell death. Profiling VLS-1272 across >100 cancer cell lines demonstrates that the specificity towards cancer cells with chromosome instability differentiates KIF18A inhibition from other clinically tested anti-mitotic drugs. Treatment of tumor xenografts with VLS-1272 results in mitotic defects leading to substantial, dose-dependent inhibition of tumor growth. The strong biological rationale, robust preclinical data, and optimized compound properties enable the clinical development of a KIF18A inhibitor in cancers with high chromosomal instability.
Insights
Researchers identified Kinesin Family Member 18A (KIF18A) as a key vulnerability in chromosomally unstable cancers. Inhibiting KIF18A with the drug VLS-1272 shows promise for treating these cancers.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Chromosome instability is a common cancer trait but remains therapeutically underexploited.
- Identifying specific vulnerabilities in chromosomally unstable (CIN) cancer cells is crucial for targeted therapies.
Purpose of the Study:
- To identify genes uniquely essential for the survival of CIN cancer cells.
- To develop and validate a targeted therapeutic strategy against CIN cancers.
Main Methods:
- Utilized the Cancer Dependency Map to find genes essential in high copy number aberration tumor cells.
- Validated Kinesin Family Member 18A (KIF18A) as a target through gene knockdown experiments.
- Screened chemical libraries to identify and optimize KIF18A inhibitors, leading to VLS-1272.
- Assessed VLS-1272's efficacy in cancer cell lines and tumor xenografts.
Main Results:
- KIF18A was identified as essential for CIN cancer cells, with its knockdown causing mitotic defects and reduced tumor growth.
- Developed VLS-1272, an orally bioavailable, potent, and selective KIF18A inhibitor.
- VLS-1272 treatment induced chromosome congression defects, mitotic arrest, and cell death.
- VLS-1272 demonstrated specific efficacy against CIN cancer cells and significantly inhibited tumor xenograft growth.
Conclusions:
- KIF18A is a validated therapeutic vulnerability in chromosomally unstable cancers.
- VLS-1272 is a promising KIF18A inhibitor with potential for clinical development.
- Targeting KIF18A offers a novel therapeutic approach for cancers characterized by high chromosomal instability.
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