C19orf12 gene variants causing mitochondrial membrane protein-associated neurodegeneration (MPAN)

Riyanka Kumari1,2, Vikram V Holla3, Neeharika Sriram3

  • 1Institute of Bioinformatics, International Technology Park, Bangalore, 560066, India.

Insights

Mitochondrial membrane protein-associated neurodegeneration (MPAN) is a rare genetic disorder. This study details seven patients, expanding knowledge of C19orf12 gene variants and MPAN

Area of Science:

  • Neurogenetics
  • Neurodegenerative Diseases
  • Molecular Genetics

Background:

  • Mitochondrial membrane protein-associated neurodegeneration (MPAN) is a rare, inherited neurodegenerative disorder.
  • MPAN is caused by variants in the C19orf12 gene, leading to spastic paraplegia, parkinsonism, and cognitive/behavioral symptoms.
  • Understanding the clinical and genetic spectrum of MPAN is crucial for diagnosis and management.

Purpose of the Study:

  • To present detailed clinical, radiological, and genetic findings of seven MPAN patients from six families.
  • To characterize the phenotypic variability based on age of onset.
  • To identify and analyze novel and known C19orf12 variants and their functional consequences.

Main Methods:

  • Clinical and neurological examinations.
  • Brain magnetic resonance imaging (MRI) for radiological assessment.
  • Whole-exome sequencing for genetic variant identification.
  • RT-PCR and Sanger sequencing for transcript analysis of splice-site variants.

Main Results:

  • Seven patients exhibited diverse phenotypes: childhood-onset with spastic ataxia and optic atrophy; adult-onset with cognitive, behavioral, and parkinsonian symptoms.
  • MRI revealed characteristic mineralization (pallidal splitting sign) and cerebellar atrophy in some patients.
  • Exome sequencing identified six C19orf12 variants, including two novel splice-site and four known missense variants.
  • Transcript analysis confirmed a splice defect and the use of an alternative cryptic splice site for the c.194-2delA variant.

Conclusions:

  • The study expands the clinical and genetic spectrum of MPAN, correlating C19orf12 variants with distinct phenotypes.
  • Genetic testing is vital for diagnosing MPAN and understanding the impact of C19orf12 variants.
  • Functional analysis of splice-site variants provides insights into MPAN pathogenesis.

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