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The Impact of Mycobacterium avium subsp. paratuberculosis on Intestinal Microbial Community Composition and Diversity
Shi-Yuan Xue1, Wei Ma1, Meng-Yuan Li1
1College of Veterinary Medicine, Inner Mongolia Agricultural University, Hohhot 010010, China.
Abstract:
Paratuberculosis (PTB), primarily caused by Mycobacterium avium subsp. paratuberculosis (MAP), is a chronic infection that affects ruminants and is difficult to prevent, diagnose, and treat. Investigating how MAP infections affect the gut microbiota in sheep can aid in the prevention and treatment of ovine PTB. This study examined fecal samples from eight small-tail Han sheep (STHS) at various stages of infection and from three different field areas. All samples underwent DNA extraction and 16S rRNA sequencing. Among all samples, the phyla p. Firmicutes and p. Bacteroidota exhibited the highest relative abundance. The dominant genera in groups M1-M6 were UCG-005, Christensenellaceae_R-7_group, Rikenellaceae_RC9_gut_group, Akkermansia, UCG-005, and Bacteroides, whereas those in groups A-C were Christensenellaceae_R-7_group, Escherichia-Shigella, and Acinetobacter, respectively. The microbial community structure varied significantly among groups M1-M6. Specifically, 56 microbiota consortia with different taxonomic levels, including the order Clostridiales, were significantly enriched in groups M1-M6, whereas 96 microbiota consortia at different taxonomic levels, including the family Oscillospiraceae, were significantly enriched in groups A-C. To the best of our knowledge, this is the first study to report that MAP infection alters the intestinal microbiota of STHS. Changes in p. Firmicutes abundance can serve as a potential biomarker to distinguish MAP infection and determine the infection stage for its early diagnosis. Our study provides a theoretical basis for the treatment of PTB by regulating the intestinal microbiota, including p. Firmicutes.
Insights
Mycobacterium avium subsp. paratuberculosis (MAP) infection alters the gut microbiota in sheep. Changes in Firmicutes abundance may indicate MAP infection and its stage, aiding diagnosis and treatment strategies.
Area of Science:
- Veterinary Microbiology
- Ruminant Health
- Gut Microbiome Research
Background:
- Paratuberculosis (PTB) is a chronic ruminant infection caused by Mycobacterium avium subsp. paratuberculosis (MAP).
- Effective prevention, diagnosis, and treatment of ovine PTB remain challenging.
- Understanding MAP's impact on the gut microbiota is crucial for developing novel interventions.
Purpose of the Study:
- To investigate the alterations in the gut microbiota composition of small-tail Han sheep (STHS) infected with MAP.
- To identify potential microbial biomarkers for MAP infection diagnosis and staging in sheep.
- To explore the potential of microbiota modulation for PTB treatment.
Main Methods:
- Fecal samples were collected from STHS at different infection stages and locations.
- DNA extraction followed by 16S rRNA gene sequencing was performed.
- Bioinformatic analysis was used to compare microbial community structures between infected and control groups.
Main Results:
- The phyla Firmicutes and Bacteroidota were the most abundant across all samples.
- Significant differences in microbial community structure were observed between infected (M1-M6) and control (A-C) groups.
- Specific microbial consortia, including the order Clostridiales and family Oscillospiraceae, were differentially abundant, with Firmicutes abundance showing potential as a diagnostic biomarker.
Conclusions:
- MAP infection significantly alters the intestinal microbiota composition in STHS.
- Changes in Firmicutes abundance can serve as a potential biomarker for early diagnosis and staging of MAP infection.
- This study provides a foundation for developing microbiota-based therapeutic strategies for ovine PTB.
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