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Sample Preparation to Bioinformatics Analysis of DNA Methylation: Association Strategy for Obesity and Related Trait Studies
Published on: May 6, 2022
Risk Factors Related to Resting Metabolic Rate-Related DNAJC6 Gene Variation in Children with Overweight/Obesity:
Jieun Shin1, Inhae Kang2, Myoungsook Lee3
1Department of Biomedical Informatics & Healthcare Data Science Center, College of Medicine, Konyang University, Daejeon 35365, Republic of Korea.
DNACJ6 gene variations impact resting metabolic rate (RMR) and obesity risk in children. A higher RMR/body weight ratio and specific dietary factors like retinol intake may mitigate obesity risk, informing precision medicine strategies.
Area of Science:
- Genetics and Molecular Biology
- Pediatric Endocrinology
- Nutritional Science
Background:
- Childhood obesity is a growing public health concern with complex genetic and environmental factors.
- The DNACJ6 gene has been implicated in metabolic regulation, but its specific role in pediatric obesity risk requires further investigation.
- Understanding gene-environment interactions is crucial for developing effective obesity prevention strategies.
Purpose of the Study:
- To investigate the association between DNACJ6 gene variations and alterations in resting metabolic rate (RMR) in children.
- To examine how these genetic variations and RMR changes interact with environmental risk factors in the context of childhood obesity.
- To identify potential genetic markers and dietary factors influencing obesity risk in children aged 8-9.
Main Methods:
- A three-year longitudinal study involving children aged 8-9, with anthropometric, blood biochemistry, and dietary intake data collected.
- Analysis of changes in variables between children classified as non-obese (non-OB) and obese (OB) at the study endpoint.
- Genotyping of nine single nucleotide polymorphisms (SNPs) within the DNACJ6 gene and assessment of their association with obesity-related parameters.
Main Results:
- The obese group exhibited greater increases in RMR, BMI, waist circumference, and systolic blood pressure compared to the non-obese group.
- Specific DNACJ6 SNPs (D-I, D-VII, D-VIII) were associated with increased RMR, BMI, and obesity risk, with mutant alleles significantly increasing BMI risk.
- Higher RMR/body weight ratio correlated with decreased BMI risk, particularly in major alleles, while high retinol intake appeared protective against obesity risk in minor alleles of specific SNPs.
Conclusions:
- The RMR/body weight ratio and dietary fat/retinol intake are significant factors to consider in DNACJ6-gene-based precision medicine for pediatric obesity prevention.
- These findings highlight the importance of personalized approaches, especially for boys, considering genetic predispositions and dietary habits.
- Further research into gene-diet interactions can refine targeted interventions for childhood obesity.
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