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Updated: Jun 3, 2025

A Sectioning, Coring, and Image Processing Guide for High-Throughput Cortical Bone Sample Procurement and Analysis for Synchrotron Micro-CT
Published on: June 12, 2020
Generating Virtual Bone Scans for the Purpose of Investigating the Effects of Cortical Microstructure
Zachary B Toth1,2, Joshua A Gargac1
1Dr. Carl D. and H. Jane Clay Department of Mechanical Engineering, Ohio Northern University, 525 S. Main Street, Ada, OH 45810.
Abstract:
Evaluating the contribution of microstructure to overall bone strength is tricky since it is difficult to control changes to pore structure in human or animal samples. We developed an open-source program that can generate three-dimensional (3D) models of micron-scale cortical bone. These models can be highly customized with a wide array of variable input parameters to allow for generation of samples similar to micro-computed topography scans of cortical bone or with specific geometric features. The program can generate samples with specific desired porosities and minor deviations in pore diameter from human samples: 1.67% (±4.90) using literature values, and 1.36% (±2.39) with optimized values. When coupled with finite element analysis, this open-source program could be a useful tool for evaluating stress distributions caused by microstructural changes.
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