Anti-proteolytic regulation of KRAS by USP9X/NDRG3 in KRAS-driven cancer development
Han Koo1,2, Kyung Chan Park1,2, Hyun Ahm Sohn1
1Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea.
Abstract:
Cancers with activating mutations of KRAS show a high prevalence but remain intractable, requiring innovative strategies to overcome the poor targetability of KRAS. Here, we report that KRAS expression is post-translationally up-regulated through deubiquitination when the scaffolding function of NDRG3 (N-Myc downstream-regulated gene 3) promotes specific interaction between KRAS and a deubiquitinating enzyme, USP9X. In KRAS-mutant cancer cells KRAS protein expression, downstream signaling, and cell growth are highly dependent on NDRG3. In conditional KrasG12D knock-in mouse models of pancreatic ductal adenocarcinoma, Ndrg3 depletion abolishes Kras protein expression and suppresses intraepithelial neoplasia formation in pancreas. Mechanistically, KRAS protein binds to the C-terminal serine/threonine-rich region of NDRG3, subsequently going through deubiquitination by USP9X recruited to the complex. This interaction can be disrupted in a dominant-negative manner by a C-terminal NDRG3 fragment that binds KRAS but is defective in USP9X binding, highly suppressing KRAS protein expression and KRAS-driven cell growth. In summary, KRAS-driven cancer development critically depends on the deubiquitination of KRAS protein mediated by USP9X/NDRG3, and KRAS-addicted cancers could be effectively targeted by inhibiting the KRAS-NDRG3 interaction.
Insights
KRAS-mutant cancers rely on NDRG3 protein for growth. Inhibiting the KRAS-NDRG3 interaction through deubiquitination by USP9X offers a new therapeutic strategy for KRAS-driven cancers.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Activating KRAS mutations are common in cancers but difficult to treat.
- Targeting KRAS remains a significant challenge in oncology.
Purpose of the Study:
- To investigate the post-translational regulation of KRAS protein.
- To identify novel therapeutic strategies for KRAS-driven cancers.
Main Methods:
- Investigated the interaction between KRAS, NDRG3, and USP9X.
- Utilized conditional KrasG12D knock-in mouse models of pancreatic ductal adenocarcinoma.
- Employed dominant-negative NDRG3 fragments to disrupt KRAS-NDRG3 interaction.
Main Results:
- NDRG3 scaffolds KRAS and USP9X, promoting KRAS deubiquitination and up-regulation.
- KRAS protein expression, signaling, and growth are dependent on NDRG3 in KRAS-mutant cells.
- NDRG3 depletion suppressed Kras protein expression and pancreatic intraepithelial neoplasia in vivo.
- Disrupting the KRAS-NDRG3 interaction suppressed KRAS protein expression and cancer cell growth.
Conclusions:
- KRAS protein deubiquitination by USP9X/NDRG3 is critical for KRAS-driven cancer development.
- Targeting the KRAS-NDRG3 interaction presents a promising therapeutic approach for KRAS-addicted cancers.
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