Computationally Efficient Polarizable MD Simulations: A Simple Water Model for the Classical Drude Oscillator

Xiaojing Teng1, Wenbo Yu1, Alexander D MacKerell1

  • 1University of Maryland Computer-Aided Drug Design Center, Department of Pharmaceutical Sciences, School of Pharmacy, University of Maryland, Baltimore, Maryland 21201, United States.

Summary

A new polarizable Drude water model, SWM3, and Lennard-Jones Particle Mesh Ewald (LJPME) significantly improve simulation efficiency. This computational advance accurately models water

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