Related Experiment Video
Updated: May 30, 2025

08:07
Probing High-density Functional Protein Microarrays to Detect Protein-protein Interactions
Published on: August 2, 2015
8.0K
A tunable affinity fusion tag for protein self-assembly.
Hannah Kimbrough1, Jacob Jensen1, Tayla Miller1
1Stowers Institute for Medical Research, Kansas City, MO.
Biorxiv : the Preprint Server for Biology
|January 27, 2025
Summary
Scientists developed a new tool using tunable amyloid to precisely control protein concentration thresholds in cells. This breakthrough enables the study of protein concentration
Area of Science:
- Cell Biology
- Biochemistry
- Synthetic Biology
Background:
- Cellular protein concentrations vary, impacting cell function.
- Limited tools exist to precisely control protein levels and study their effects.
Purpose of the Study:
- To develop a novel genetically encoded tool for precise control of protein concentration thresholds.
- To investigate the functional consequences of protein concentration variation in cells.
Main Methods:
- Screening of dipeptide repeats to identify suitable candidates for amyloid formation.
- Engineering a tunable amyloid system based on poly-threonine alanine (poly-TA).
- Demonstrating fine-tuning of poly-TA saturating concentration (Csat) by adjusting repeat length.
Main Results:
- Identified poly-TA as an ideal candidate for forming amyloid-like assemblies with tunable nucleation barriers.
- Poly-TA allows for precise control over protein concentration thresholds.
- The Csat of poly-TA can be modulated by altering the length of uninterrupted TA repeats.
Conclusions:
- The developed tunable amyloid tool provides a modular system for manipulating protein solubility.
- This tool facilitates the investigation of relationships between protein concentration, phase separation, and cellular function.
- Potential applications span cell biology, developmental biology, and synthetic biology.
Related Concept Videos
Tagging and Fusion Proteins
6.6K
Proteins are involved in several cellular processes and biochemical reactions. Analyzing a specific protein of interest requires it to be isolated from the other proteins in the cell. This is achieved by overexpressing the specific gene in a suitable host to produce large quantities of the target protein. A tag or label is recombined with the gene to produce a fusion protein containing the target protein and the tag. The tags on these fusion proteins can then be used for easy detection and...
6.6K
Assembly of Cytoskeletal Filaments
16.9K
Cytoskeletal filaments are polymeric forms of smaller protein subunits. However, individual cytoskeletal filaments may easily disassemble or associate with other similar filaments to form rigid structures. Microfilaments, made of actin monomers, rely on actin-binding proteins to form bundles and create networks of individual actin filaments. Microtubules rely on microtubule-associated proteins (MAPs) to form sturdy cylindrical structures. However, the proteins involved in forming complex...
16.9K
Protein Complexes with Interchangeable Parts
2.5K
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
2.5K
Protein Complex Assembly
10.5K
Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types. Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Many viruses self-assemble into a fully functional unit using the infected host cell to...
10.5K

