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Metabolic Fingerprint of Dual Body Fluids Deciphers Diabetic Retinopathy.
Yihan Wang1, Shunxiang Li1, Tong Li2
1State Key Laboratory for Oncogenes and Related Genes, School of Biomedical Engineering, Institute of Medical Robotics and Med-X Research Institute, Shanghai Jiao Tong University, Shanghai, 200030, P. R. China.
This study introduces a novel machine learning platform for early diabetic retinopathy (DR) detection using dual biofluid metabolic fingerprints. The innovative approach aids in identifying biomarkers for improved diagnosis and treatment of this diabetes complication.
Area of Science:
- Biomedical Science
- Analytical Chemistry
- Computational Biology
Background:
- Diabetic retinopathy (DR) is a major microvascular complication of diabetes, impacting millions globally.
- Early detection and treatment are crucial for improving DR prognosis.
- Metabolomic analysis offers a powerful method for understanding disease pathophysiology and identifying biomarkers.
Purpose of the Study:
- To establish an innovative workflow for vitreous liquid analysis.
- To develop a machine learning-based platform for DR detection using dual biofluid metabolic fingerprints.
- To identify potential biomarkers for clinical diagnosis and treatment of diabetic retinopathy.
Main Methods:
- Development of a nanoparticle-enhanced laser desorption/ionization mass spectrometry workflow for vitreous liquid and plasma metabolic fingerprinting.
- Integration of vitreous liquid metabolic fingerprint (VL-MF) and plasma metabolic fingerprint (P-MF) data.
- Application of machine learning for DR patient classification and biomarker panel construction.
Main Results:
- Direct VL-MF and P-MF were obtained with high reproducibility (CV <5%) and speed (3s/sample).
- The dual biofluid-MF platform distinguished DR patients from healthy controls with an AUC of 0.957.
- A biomarker candidate panel achieved an AUC of 0.945, with related metabolic pathways identified.
Conclusions:
- The developed multi-biofluid platform demonstrates high accuracy and speed for diabetic retinopathy detection.
- This approach facilitates the discovery of novel biomarkers and provides a robust tool for clinical applications.
- The study offers a significant advancement in leveraging metabolomics and machine learning for diagnosing diabetes complications.
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