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Updated: May 29, 2025

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Published on: August 3, 2021
Depth-Resolved Temperature-Dependent Penetration of Polymyxin B in Phospholipids/Lipopolysaccharide Asymmetric
Nicoló Paracini1, Jeremy H Lakey2, Luke A Clifton3
1Institut Laue-Langevin, Large Scale Structures Group, 71 Avenue des Martyrs, Grenoble 38000, France.
Abstract:
The lipid matrix of the outer membrane (OM) of Gram-negative bacteria consists of a highly asymmetric lipid bilayer containing phospholipids on the inner leaflet and lipopolysaccharides (LPS) in the outer layer. The latter ensures that harmful molecules do not permeate the bacterial cell, but polymyxin B (PmB), a last-resort antibiotic, is capable of interfering with the stability of the LPS layer and overcoming the OM barrier. We have previously shown that the efficacy of PmB in disrupting isotopically asymmetric OM models (2H-phospholipids and 1H-LPS) is regulated by the gel-to-fluid phase transition of the LPS layer. Here, we employ fully deuterated OM models (2H-phospholipids and 2H-LPS) to track the temperature-dependent penetration of PmB within the model membrane by using neutron reflectometry. We use a model-independent approach to quantify PmB penetration as a function of both concentration and temperature as well as a model-dependent analysis to localize PmB in the asymmetric bilayer. By leveraging the ability of neutrons to differentiate hydrogen from deuterium in structural biology we find that PmB hijacks LPS molecules and accumulates predominantly in the hydrophobic region of lipid A.
Insights
Polymyxin B (PmB) antibiotic penetrates Gram-negative bacteria outer membranes by targeting lipopolysaccharides (LPS). This study reveals PmB accumulates in the lipid A hydrophobic region, hijacking LPS for entry.
Area of Science:
- Microbiology
- Biophysics
- Structural Biology
Background:
- Gram-negative bacteria possess a protective outer membrane (OM) with an asymmetric lipid bilayer.
- Lipopolysaccharides (LPS) form the outer layer of the OM, acting as a barrier against harmful molecules.
- Polymyxin B (PmB) is a critical antibiotic that disrupts the OM barrier by interacting with LPS.
Purpose of the Study:
- To investigate the temperature-dependent penetration of PmB into fully deuterated OM models.
- To quantify PmB penetration and localization within the asymmetric OM bilayer.
- To elucidate the mechanism by which PmB interacts with LPS and lipid A.
Main Methods:
- Utilized neutron reflectometry with fully deuterated OM models (2H-phospholipids and 2H-LPS).
- Employed model-independent and model-dependent analyses to quantify PmB penetration and localization.
- Leveraged neutron scattering's ability to differentiate hydrogen and deuterium.
Main Results:
- PmB penetration into the OM model was quantified as a function of concentration and temperature.
- Neutron reflectometry revealed PmB accumulates predominantly in the hydrophobic region of lipid A.
- The study confirmed PmB hijacks LPS molecules for entry into the bacterial outer membrane.
Conclusions:
- Polymyxin B targets the lipid A component of LPS within the bacterial outer membrane.
- Understanding PmB-LPS interactions is crucial for developing new strategies against Gram-negative infections.
- Neutron reflectometry provides a powerful tool for studying antibiotic-membrane interactions at a molecular level.
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