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Extraction of Aqueous Metabolites from Cultured Adherent Cells for Metabolomic Analysis by Capillary Electrophoresis-Mass Spectrometry
Published on: June 9, 2019
Liquid Chromatography-High-Resolution Mass Spectroscopy-Based Metabolomics for Identification Cytotoxic Compounds
Elok Kamilah Hayati1,2, Akhmad Sabarudin1, Aulanni'am1
1Department of Chemistry, Faculty of Mathematics and Natural Sciences, Brawijaya University, Jl. Veteran, Malang, Indonesia.
Acalypha indica, a traditional remedy, shows anticancer potential. Metabolomic analysis identified six compounds, including (+)-catechin and hernanol, contributing to its cytotoxic effects against cancer cells.
Area of Science:
- Phytochemistry
- Pharmacology
- Metabolomics
Background:
- Acalypha indica is traditionally used for cancer treatment.
- Identifying specific bioactive compounds is crucial for understanding its therapeutic potential.
- A metabolomic approach offers a comprehensive strategy for drug discovery from natural sources.
Purpose of the Study:
- To employ a metabolomic strategy to identify cytotoxic compounds in Acalypha indica with potential anticancer properties.
- To correlate metabolite profiles with cytotoxic activity against MCF-7 cells.
- To investigate the binding affinity of identified compounds to the alpha-estrogen receptor.
Main Methods:
- Extraction of Acalypha indica leaves using various solvents (ethanol, ethyl acetate, chloroform, n-hexane).
- Cytotoxicity evaluation using MCF-7 cells to determine IC50 values.
- Metabolite profiling via liquid chromatography-high-resolution mass spectrometry (LC-HRMS).
- Statistical analysis including Principal Component Analysis (PCA) and Orthogonal Partial Least Squares-Discriminant Analysis (OPLS-DA).
- In silico analysis for receptor binding prediction.
Main Results:
- Cytotoxic activity (IC50 values) ranged from 51.88 ± 7.80 to 226.86 ± 13.27 µg/mL.
- LC-HRMS identified 27 metabolites, with PCA showing distinct profiles based on solvent extraction.
- OPLS-DA successfully correlated metabolite profiles with cytotoxic data, predicting six key compounds: hernanol, 13(S)-HpOTrE, (±)9-HpODE, (+)-catechin, traumatic acid, and theobromine.
- In silico analysis indicated that (+)-catechin and hernanol exhibit binding affinity to the alpha-estrogen receptor comparable to doxorubicin.
Conclusions:
- This study successfully identified six compounds from Acalypha indica contributing to its anticancer activity using a metabolomic approach.
- (+)-Catechin and hernanol show promise as potential anticancer agents due to their interaction with the alpha-estrogen receptor.
- The findings support the traditional use of Acalypha indica and provide a foundation for further investigation into its pharmaceutical applications.
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