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Virtual screening combined with molecular docking for the !identification of new anti-adipogenic compounds
Gilberto Mandujano-Lázaro1, María F Torres-Rojas1, Esther Ramírez-Moreno1
1Laboratorio de Biomedicina Molecular 2, ENMH, Instituto Politécnico Nacional, Ciudad de México, México.
Abstract:
Obesity is an important risk factor for diabetes, cardiovascular diseases, and cancer, reducing the quality of life and expectancy of millions of people. Consequently, obesity has turned into one of the most health public problems worldwide, which highlights the urgent need for new and safe treatments. Obesity is mainly related to excessive fat accumulation; therefore, proteins participating in white adipose tissue increase and dysfunction are considered pertinent and attractive targets for developing new methods that can help with body weight control. In this context, virtual screening of libraries containing a large number of molecules represents a valuable strategy for the identification of potential anti-adipogenic compounds with reduced costs and time production. Here, we review the scientific literature about the prediction of new ligands of specific proteins through molecular docking and virtual screening of chemical libraries, with the aim of proposing new potential anti-adipogenic molecules. First, we present the targets related to adipogenesis and adipocyte functions that were selected for the following studies: PPARγ, Crif1, SIRT1, ERβ, PC1, FTO, Mss51, and FABP4. Then, we describe the obtention of new ligands according to the characteristics of the virtual screening approach, i.e. a structure-based drug design (SBDD) or a ligand-based drug design (LBDD). Finally, the critical analysis of these computational strategies and the corresponding results points out the necessity of combining computational and in vitro or in vivo assays for the identification of effective new anti-adipogenic molecules for obesity control. It also evidences that translating molecular docking and virtual screening results into successful drug candidates for adipogenesis and obesity control remains a huge challenge.
Insights
Virtual screening and molecular docking identify potential anti-adipogenic compounds for obesity control. Combining computational methods with experimental assays is crucial for developing effective obesity treatments.
Area of Science:
- Biochemistry
- Pharmacology
- Computational Chemistry
Background:
- Obesity is a major global health issue, increasing risks for diabetes, cardiovascular diseases, and cancer.
- Excessive fat accumulation drives obesity, making proteins involved in white adipose tissue function key targets for weight management therapies.
Purpose of the Study:
- To review literature on predicting new ligands for anti-adipogenic targets using molecular docking and virtual screening.
- To identify potential anti-adipogenic molecules for obesity control through computational strategies.
Main Methods:
- Literature review focusing on virtual screening and molecular docking techniques.
- Identification of key targets involved in adipogenesis and adipocyte function, including PPARγ, Crif1, SIRT1, ERβ, PC1, FTO, Mss51, and FABP4.
- Description of ligand acquisition using structure-based drug design (SBDD) and ligand-based drug design (LBDD) approaches.
Main Results:
- Virtual screening and molecular docking are valuable for identifying potential anti-adipogenic compounds cost-effectively.
- Several protein targets related to adipogenesis were identified for drug discovery efforts.
- The study highlights the potential of computational methods in discovering novel therapeutic agents for obesity.
Conclusions:
- Combining computational predictions with in vitro and in vivo assays is essential for validating and developing effective anti-adipogenic molecules.
- Translating virtual screening and molecular docking findings into successful drug candidates for obesity remains a significant challenge.
- This review underscores the importance of computational approaches in the ongoing search for novel obesity treatments.
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