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Updated: May 28, 2025

Finite Element Modelling of a Cellular Electric Microenvironment
Published on: May 18, 2021
No Boundaries and Naturally-Defined Boundaries Obtained via the Electrostatic Potential
Goedele Roos1, Danny E P Vanpoucke2,3, Jane S Murray4
1CNRS, UMR 8576 - UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, Univ. Lille, F-59000, Lille, France.
Electrostatic potentials at nuclei reveal atoms within molecules without physical separation. This method, explored in older and recent literature, defines meaningful atomic radii in molecular structures.
Area of Science:
- Quantum Chemistry
- Computational Chemistry
- Molecular Modeling
Background:
- The concept of atoms existing within molecules is explored using electrostatic potentials.
- Older literature (1970s-1990s) on electrostatic potentials and atomic radii is often inaccessible.
- Recent work (e.g., Politzer & Murray, 2022) highlights the relevance of electrostatic potentials at nuclei.
Purpose of the Study:
- To review the historical and current use of electrostatic potentials in defining atoms within molecules.
- To emphasize the importance of older, potentially lost literature on this topic.
- To discuss the definition of atomic radii using electrostatic potentials.
Main Methods:
- Analysis of electrostatic potentials at nuclei.
- Review of historical and recent scientific literature.
- Summarization of Politzer group's work on atomic radii definitions.
Main Results:
- Electrostatic potentials at nuclei provide a means to identify atoms within molecules without physical separation.
- The Politzer group's research offers a method for defining atomic radii based on electrostatic potentials.
- Older studies, though valuable, are often overlooked due to accessibility issues.
Conclusions:
- Electrostatic potentials offer a robust framework for understanding atomic structure within molecules.
- Atomic radii can be meaningfully defined using electrostatic potential calculations.
- Revisiting older literature provides crucial insights into contemporary molecular modeling techniques.
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