Related Experiment Video
Updated: May 28, 2025

10:26
Profiling Ubiquitin and Ubiquitin-like Dependent Post-translational Modifications and Identification of Significant Alterations
Published on: November 7, 2019
5.5K
Chemical approaches to explore ubiquitin-like proteins
Reem Mousa1, Dana Shkolnik1, Yam Alalouf1
1Schulich Faculty of Chemistry, Technion-Israel Institute of Technology Haifa 3200008 Israel abrik@technion.ac.il.
RSC Chemical Biology
|February 14, 2025
Summary
Chemical protein synthesis offers precise control for creating ubiquitin (Ub) and ubiquitin-like modifiers (Ubls). This method aids in studying Ubl biology, crucial for understanding cellular regulation and disease.
Area of Science:
- Biochemistry
- Molecular Biology
- Chemical Biology
Background:
- Ubiquitin (Ub) and ubiquitin-like modifiers (Ubls) are critical for protein homeostasis and cellular processes.
- Ubls share structural and conjugation pathway similarities with Ub, forming covalent isopeptide bonds with substrates.
- Distinct functional roles of Ub and Ubls necessitate detailed study for understanding cellular regulation.
Purpose of the Study:
- To review chemical methodologies for synthesizing Ub and Ubls.
- To highlight strategies for studying Ubls and their biological roles.
- To advance the comprehensive understanding of the Ubl system in health and disease.
Main Methods:
- Chemical protein synthesis for producing Ub and Ubls, including conjugated forms.
- Generation of complex constructs with site-specific modifications.
- Application of these constructs in functional and structural studies.
Main Results:
- Chemical synthesis provides precise control over Ub and Ubl assembly, overcoming limitations of recombinant or enzymatic methods.
- Enables creation of modified Ub and Ubl constructs for detailed biological investigations.
- Facilitates research into the distinct functional differences between Ub and various Ubls.
Conclusions:
- Chemical synthesis is a powerful tool for advancing Ub and Ubl research.
- Understanding the Ubl system is vital for deciphering cellular regulatory networks.
- Disruptions in Ubl pathways are linked to various diseases, underscoring the importance of this research area.
Related Concept Videos
Covalently Linked Protein Regulators
6.8K
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein....
These groups modify specific amino acids in a protein....
6.8K
The Proteasome
801
Eukaryotic cells can degrade proteins through several pathways. One of the most important among these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
801
Regulated Protein Degradation
7.1K
It is vital to regulate the activity of enzymatic as well as non-enzymatic proteins inside the cell. This can be achieved either through creating a balance between their rate of synthesis and degradation or regulating the intrinsic activity of the protein. Both these regulation mechanisms play an essential role in the normal functioning of cells.
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
7.1K
The Proteasome Structure
677
The ubiquitin-proteasome pathway is a well-known mechanism utilized by eukaryotic cells to remove cytoplasmic proteins that are misfolded, damaged, or no longer needed. In this pathway, the protein that needs to be eliminated undergoes a process called ubiquitination, where a chain of ubiquitin molecules is attached to the 48th lysine residue of the target protein. This ubiquitin modification helps the proteasome distinguish between a target protein and a healthy protein.
The proteasome is an...
The proteasome is an...
677

