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Chroman-Schiff base derivatives as potential Anti-Tubercular Agents: In silico studies, Synthesis, and Biological
Samar Mujeeb1, Kuldeep Singh2, Martha K Al-Zrkani3
1Department of Pharmaceutical Chemistry, Hygia Institute of Pharmaceutical Education &Research, Lucknow, Uttar Pradesh 226020, India.
Bioorganic Chemistry
|February 18, 2025
Summary
New chroman-Schiff base derivatives show promise as anti-tuberculosis agents. Computational and in vitro studies identified potent compounds, SM-2 and SM-5, with activity comparable to existing drugs.
Area of Science:
- Medicinal Chemistry
- Computational Chemistry
- Microbiology
Background:
- Tuberculosis (TB) remains a global health crisis, necessitating novel therapeutic strategies.
- Hydrazide-containing compounds have shown potential against TB.
- Chroman-Schiff base derivatives offer a novel scaffold for anti-TB drug development.
Purpose of the Study:
- To design, synthesize, and evaluate novel chroman-Schiff base derivatives as potential anti-TB agents.
- To investigate the binding interactions of these derivatives with the TB target protein InhA using in silico methods.
- To assess the in vitro anti-tubercular activity of the synthesized compounds.
Main Methods:
- Synthesis and structural validation of chroman-Schiff base derivatives using spectroscopic techniques (FTIR, NMR, HR-MS).
- In silico studies including molecular docking and molecular dynamics simulations against the InhA protein (PDB ID: 1ZID).
- In vitro anti-tubercular assays against Mycobacterium tuberculosis H37Rv using the Microplate Alamar Blue Assay (MABA).
Main Results:
- Molecular docking identified R-isomer derivatives (SM-5A, SM-6A) with superior binding affinities to InhA compared to reference ligands.
- Molecular dynamics simulations confirmed the stability of these compound-protein complexes over 100 ns.
- In vitro assays revealed potent anti-TB activity for SM-2 and SM-5, with minimum inhibitory concentrations (MIC) of 32 µg/mL, comparable to standard drugs.
Conclusions:
- The chroman-Schiff base scaffold is a promising foundation for developing new anti-TB therapeutics.
- Computational and experimental data support the potential of these derivatives for further optimization.
- The synthesized compounds demonstrate significant potential as novel anti-tubercular agents.

