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Published on: July 5, 2019
Different Stacking Types in a Single Hybrid Cocrystal System: π···π- and π-Hole-Based Organic-Inorganic Planar
Sergey V Baykov1, Eugene A Katlenok1, Artem V Semenov1
1Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Nab., Saint Petersburg 199034, Russian Federation.
Abstract:
The planar bis-chelated complex [Pd(N∩O)2] (1; N∩O = 4-MeC5H3NNC(O)NMe2) exhibits two distinct stacking modes with electron-deficient aromatics: π···π stacking with hexafluorobenzene (C6F6) versus charge-transfer π-hole interactions with 1,2,4,5-tetracyanobenzene (TCB). Cocrystallization of the complex with C6F6 or TCB yields cocrystals 1·3(C6F6) and 1·2TCB, respectively, which display different colors and stacking patterns despite similar structural motifs. Comprehensive analysis using X-ray diffraction, combined with quantum theory of atoms-in-molecules (QTAIM), an independent gradient model based on Hirshfeld partition (IGMH), extended transition state natural orbital for chemical valence theory with charge displacement function (ETS-NOCV/CDF), many-body interaction analysis, and symmetry-adapted perturbation theory (SAPT), reveals fundamentally different interaction mechanisms. In 1·3(C6F6), the stacking is primarily governed by intermolecular polarization without significant charge transfer, with dispersion forces contributing approximately 70% of the attractive energy. In contrast, 1·2TCB exhibits pronounced charge transfer (35 me) and significant inductive components alongside dispersion forces, characteristic of π-hole interactions. This dichotomy in stacking behavior provides new insights into the nature of organic-inorganic planar assemblies and demonstrates that seemingly similar structural patterns can arise from distinctly different combinations of noncovalent forces, which is essential for rational crystal engineering of hybrid materials.
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