Modulating tumor immunity using advanced microbiome therapeutics producing an indole metabolite

Troels Holger Vaaben1, Ditte Olsen Lützhøft1, Andreas Koulouktsis1

  • 1Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kgs. Lyngby, DK2800, Denmark.

EMBO Reports
|March 7, 2025
PubMed

Insights

Engineered bacteria delivering indole-3-acetic acid enhance anti-tumor immunity by activating the aryl hydrocarbon receptor (AhR). This microbiome-based therapy inhibits tumor growth and improves survival, offering a promising approach for cancer treatment.

Area of Science:

  • Oncology
  • Immunology
  • Microbiology

Background:

  • The gut microbiome influences immune responses against cancer.
  • Microbial indole metabolites activate the aryl hydrocarbon receptor (AhR), impacting immune cell regulation.
  • Elevated metabolite levels correlate with improved survival in cancer patients.

Purpose of the Study:

  • To engineer bacteria for enhanced anti-tumor immunity.
  • To investigate the role of microbial metabolites in modulating the tumor microenvironment.
  • To evaluate the therapeutic potential of engineered bacteria in cancer models.

Main Methods:

  • Engineered Escherichia coli Nissle 1917 to produce indole-3-acetic acid (an AhR agonist).
  • Administered engineered bacteria to a murine tumor model.
  • Analyzed changes in the tumor microenvironment, including cytokine levels (CXCL9, IFN-γ) and T-cell populations.
  • Assessed tumor growth, survival rates, and long-term immunity through rechallenge experiments.

Main Results:

  • Engineered bacteria delivered indole-3-acetic acid, altering the tumor microenvironment.
  • Significant increases in CXCL9, IFN-γ, and tumor-infiltrating T-cell abundance and activation were observed.
  • Treatment inhibited tumor growth, improved survival in syngeneic models, and induced long-lasting anti-tumor immunity.
  • Direct AhR activation by indole-3-acetic acid was identified as the driver of immune modulation.

Conclusions:

  • Microbiome-based interventions hold promise for cancer therapy.
  • Engineered bacteria producing AhR agonists can enhance anti-tumor immune responses.
  • This approach modulates the tumor microenvironment, leading to tumor growth inhibition and improved survival.

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