Search research articles

ABOUT JoVE

Overview Leadership Blog JoVE Help Center

AUTHORS

Publishing Process Editorial Board Scope & Policies Peer Review FAQ Submit

LIBRARIANS

Testimonials Subscriptions Access Resources Library Advisory Board FAQ

RESEARCH

JoVE Journal Methods Collections JoVE Encyclopedia of Experiments Archive

EDUCATION

JoVE Core JoVE Business JoVE Science Education JoVE Lab Manual Faculty Resource Center Faculty Site

Terms & Conditions of Use

Related Concept Videos

Light Acquisition

Light Acquisition

In order to produce glucose, plants need to capture sufficient light energy. Many modern plants have evolved leaves specialized for light acquisition. Leaves can be only millimeters in width or tens of meters wide, depending on the environment. Due to competition for sunlight, evolution has driven the evolution of increasingly larger leaves and taller plants, to avoid shading by their neighbors with contaminant elaboration of root architecture and mechanisms to transport water and nutrients.

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by

Same author

Artificial Intelligence in Echocardiography for Valvular Heart Disease.

Trends in cardiovascular medicine·2026

Same author

Establishment and Parameter Calibration of a Discrete Element Model for Shanghai Bok Choy Plug Seedling.

Plants (Basel, Switzerland)·2026

Same author

Abundance and partitioning of nitrogen and phosphorus in Lake Chaohu, China: Seasonal particulate effects on lake re-eutrophication.

Journal of environmental sciences (China)·2026

Same author

Case Report: Tibial plateau fracture in Charcot neuroarthropathy: a report of two cases with contrasting outcomes.

Frontiers in surgery·2026

Same author

Study on the Synergistic Mechanism of Zwitterionic Surfactants and Nano-SiO<sub>2</sub> Particles in Oil Displacement.

Langmuir : the ACS journal of surfaces and colloids·2026

Same author

Photothermal Ablation Blotting for Capillary-Scale Microvasculature Engineering.

Advanced materials (Deerfield Beach, Fla.)·2026

Search research articles

Related Experiment Video

Updated: May 22, 2025

RGB and Spectral Root Imaging for Plant Phenotyping and Physiological Research: Experimental Setup and Imaging Protocols

RGB and Spectral Root Imaging for Plant Phenotyping and Physiological Research: Experimental Setup and Imaging Protocols

Published on: August 8, 2017

RPT: An integrated root phenotyping toolbox for segmenting and quantifying root system architecture.

Jiawei Shi¹, Shangyuan Xie¹, Weikun Li¹

¹National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China.

Plant Biotechnology Journal

|March 12, 2025

Summary

This summary is machine-generated.

Researchers developed a cost-effective platform and software for high-throughput rice root phenotyping. This enables efficient screening of drought-resistance genes, advancing crop breeding and genetic architecture studies.

Keywords:

deep learning high‐throughput phenotyping platform rice drought resistance root phenotyping root system architecture

More Related Videos

Extracting Metrics for Three-dimensional Root Systems: Volume and Surface Analysis from In-soil X-ray Computed Tomography Data

Extracting Metrics for Three-dimensional Root Systems: Volume and Surface Analysis from In-soil X-ray Computed Tomography Data

Published on: April 26, 2016

A Simple Protocol for Mapping the Plant Root System Architecture Traits

A Simple Protocol for Mapping the Plant Root System Architecture Traits

Published on: February 10, 2023

Related Experiment Videos

Last Updated: May 22, 2025

RGB and Spectral Root Imaging for Plant Phenotyping and Physiological Research: Experimental Setup and Imaging Protocols

RGB and Spectral Root Imaging for Plant Phenotyping and Physiological Research: Experimental Setup and Imaging Protocols

Published on: August 8, 2017

Extracting Metrics for Three-dimensional Root Systems: Volume and Surface Analysis from In-soil X-ray Computed Tomography Data

Extracting Metrics for Three-dimensional Root Systems: Volume and Surface Analysis from In-soil X-ray Computed Tomography Data

Published on: April 26, 2016

A Simple Protocol for Mapping the Plant Root System Architecture Traits

A Simple Protocol for Mapping the Plant Root System Architecture Traits

Published on: February 10, 2023

Area of Science:

Agricultural Science
Plant Biology
Genetics

Background:

High-throughput root phenotyping is crucial for understanding rice genetic architecture but presents significant challenges.
Efficient analysis of large root sample datasets is essential for genetic studies and crop improvement.

Purpose of the Study:

To develop a cost-effective, high-throughput root phenotyping platform and associated software (RPT).
To apply the platform and software for screening quantitative trait loci (QTL) regions associated with drought resistance in rice.
To validate the function of a specific gene (OsIAA8) involved in drought resistance.

Main Methods:

Establishment of a rapid root phenotyping platform analyzing 1680 samples in 2 hours.
Development of the root phenotyping toolbox (RPT) utilizing an enhanced SegFormer algorithm for image segmentation and trait analysis.
Screening of 219 rice recombinant inbred lines under drought stress to identify candidate QTL regions.

Main Results:

The platform and RPT software significantly improved the efficiency of high-throughput root phenotyping.
Identified 18 candidate QTL regions associated with drought stress tolerance in rice.
Validated the drought-resistant function of the gene OsIAA8.

Conclusions:

The developed root phenotyping platform and RPT software offer great potential for analyzing diverse image sources and mining stress-resistance genes.
This advancement facilitates large-scale root trait analysis, promoting genetic improvement of drought-resistant rice cultivars and crop breeding research.