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Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
A novel gene linked to Imipenem resistance in E. coli isolate lacking known Imipenem-resistance genes
Trang Thu Hoang1, Huyen Thanh Thi Le2, Sang Ngoc Nguyen3
1Department of Genomics, Institute of Biomedicine & Pharmacy, Military Medical University, Hanoi, Vietnam.
Abstract:
Imipenem-resistant Escherichia coli strains represent a growing public health concern, posing a threat due to their resistance to last-resort antibiotics. Here, we present the discovery of the Imipenem-Linked Resistance Gene VIN (ILR-VIN) within E. coli isolates from Vietnam, revealing its absence in non-resistant E. coli and local bacterial species. ILR-VIN constitutes a previously unrecognized genetic element potentially linked to Imipenem resistance, with notable prevalence in Vietnamese E. coli strains.We conducted an in-depth examination of the genetic basis of Carbapenem resistance in E. coli strains causing urinary tract infections. In a set of 47 UTI strains, we identified five displaying Imipenem resistance, with four of them carrying known resistance genes. Interestingly, ECV219, despite exhibiting Imipenem resistance, lacked known resistance genes, suggesting an unreported resistance mechanism. Comparative genetic analysis revealed distinct genes in ECV219, indicating a novel Imipenem resistance gene. To assess its function, we conducted transformation experiments in E. coli Rosetta™(DE3)pLysS and performed bioinformatics analyses using BLASTp, InterProScan, and Pfam to characterize the gene's structure and potential functions.Our study identifies ILR-VIN as a novel gene linked to Imipenem resistance in E. coli isolate lacking known Imipenem-resistance genes. Experimental evidence confirmed that ILR-VIN expression enhances bacterial survival under Imipenem stress, providing direct evidence of its role in resistance. This discovery highlights the importance of ongoing research into antibiotic resistance genes to develop effective treatment strategies against antibiotic-resistant bacterial infections.
Insights
A novel Imipenem-Linked Resistance Gene VIN (ILR-VIN) was discovered in Imipenem-resistant Escherichia coli from Vietnam. This previously unrecognized gene enhances bacterial survival under Imipenem stress, offering new insights into antibiotic resistance mechanisms.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Imipenem-resistant Escherichia coli (E. coli) strains are a significant public health concern due to their resistance to last-resort antibiotics.
- Carbapenem resistance in E. coli, particularly in strains causing urinary tract infections (UTIs), necessitates the identification of novel resistance mechanisms.
Purpose of the Study:
- To identify and characterize a novel gene responsible for Imipenem resistance in E. coli isolates lacking known resistance mechanisms.
- To investigate the prevalence and functional role of this new gene in antibiotic resistance.
Main Methods:
- Isolation and screening of Imipenem-resistant E. coli strains from urinary tract infections.
- Comparative genomic analysis to identify unique genetic elements in resistant strains.
- Gene cloning, transformation experiments in E. coli, and bioinformatics analyses (BLASTp, InterProScan, Pfam) to confirm gene function and structure.
Main Results:
- Discovery of the Imipenem-Linked Resistance Gene VIN (ILR-VIN) in an Imipenem-resistant E. coli isolate (ECV219) that lacked previously identified resistance genes.
- ILR-VIN was absent in susceptible E. coli and other local bacterial species, suggesting specificity.
- Experimental evidence confirmed that ILR-VIN expression confers enhanced survival of E. coli under Imipenem antibiotic stress.
Conclusions:
- ILR-VIN represents a novel genetic determinant of Imipenem resistance in E. coli.
- This discovery underscores the need for continuous surveillance and characterization of emerging antibiotic resistance genes.
- Understanding novel resistance mechanisms is crucial for developing effective strategies against multidrug-resistant bacterial infections.
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