Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Improving Translational Accuracy02:07

Improving Translational Accuracy

2.5K
2.5K
Bioequivalence: Overview01:16

Bioequivalence: Overview

901
Pharmaceutical equivalents, by definition, are drug products with the same active ingredient in the same quantities, encapsulated in identical dosage forms, and intended for the same administration routes. These pharmaceutical equivalents are deemed bioequivalent if the bioavailability of the active entity in the drug preparations is similar. Moreover, pharmaceutical equivalents demonstrating bioequivalence are also regarded as therapeutically equivalent. This means that when used as directed,...
901
Imaging Biological Samples with Optical Microscopy01:18

Imaging Biological Samples with Optical Microscopy

4.5K
Optical microscopy uses optic principles to provide detailed images of samples. Antonie van Leeuwenhoek designed the first compound optical microscope in the 17th century to visualize blood cells, bacteria, and yeast cells. In 1830, Joseph Jackson Lister created an essentially modern light microscope. The 20th century saw the development of microscopes with enhanced magnification and resolution.
In optical microscopy, the specimen to be viewed is placed on a glass slide and clipped on the stage...
4.5K
Patient-centered Care01:13

Patient-centered Care

1.9K
Patient-centered care involves delivering care beyond inpatient hospitalization. Reflective practice can enhance a patient-centered approach. Reflective practice is a process of reasoning that considers all aspects of the present situation, including practicalities, learning from personal practice, and consideration of patient needs. Patients appreciate care decisions made while considering their input. Involving the patient in their care provides the patient with a sense of contribution rather...
1.9K
CRISPR01:59

CRISPR

48.8K
Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
48.8K
Classification of Illness01:17

Classification of Illness

7.2K
The meaning of illness is individualized to each person who experiences an alteration in health. In contrast, disease is a medical term indicating a pathological change in the structure and function of the body or mind. It is a condition that has specific symptoms and boundaries.
An illness is a response to a disease in which the person's level of functioning is changed compared with a previous level. The general classification of illness includes acute and chronic.
Acute illness is severe...
7.2K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Automated biomedical hypothesis generation with time-aware hypergraph contrastive learning.

Knowledge and information systems·2026
Same author

Semantic Knowledge Augmented Hypergraph Contrastive Representation Learning for Zero-Shot Biomedical Text Classification.

Advances in knowledge discovery and data mining : ... Pacific-Asia Conference, PAKDD ..., proceedings. Pacific-Asia Conference on Knowledge Discovery and Data Mining·2025
Same author

ConceptDrift: leveraging spatial, temporal and semantic evolution of biomedical concepts for hypothesis generation.

Bioinformatics (Oxford, England)·2025
Same author

Boosting Social Determinants of Health Extraction with Semantic Knowledge Augmented Large Language Model.

AMIA ... Annual Symposium proceedings. AMIA Symposium·2025
Same author

Learning to Rank Complex Biomedical Hypotheses for Accelerating Scientific Discovery.

Proceedings. IEEE International Conference on Healthcare Informatics·2025
Same author

Continually-Adaptive Representation Learning Framework for Time-Sensitive Healthcare Applications.

Proceedings of the ... ACM International Conference on Information & Knowledge Management. ACM International Conference on Information and Knowledge Management·2025
Same journal

A Knowledge-Guided Large Language Model Framework for Microbiome-Based Disease Diagnosis.

Proceedings. IEEE International Conference on Bioinformatics and Biomedicine·2026
Same journal

Vital Measurements of Hospitalized COVID-19 Patients as a Predictor of Long COVID: An EHR-based Cohort Study from the RECOVER Program in N3C.

Proceedings. IEEE International Conference on Bioinformatics and Biomedicine·2026
Same journal

Geospatial Analysis of Socioeconomic Equity and Environmental Factors Influencing Lung Cancer Prevalence in US.

Proceedings. IEEE International Conference on Bioinformatics and Biomedicine·2026
Same journal

Modeling TCR-pMHC Binding with Dual Encoders and Cross-Attention Fusion.

Proceedings. IEEE International Conference on Bioinformatics and Biomedicine·2026
Same journal

Utilizing Large Language Models for Zero-Shot Medical Ontology Extension from Clinical Notes.

Proceedings. IEEE International Conference on Bioinformatics and Biomedicine·2026
Same journal

Uncovering the Role of Neuropsychiatric Symptoms in Cognitive Impairment Progression.

Proceedings. IEEE International Conference on Bioinformatics and Biomedicine·2026
See all related articles

Related Experiment Video

Updated: May 21, 2025

Author Spotlight: Impact of Intergenic Interactions on Disease-Identifying Dark Biomarkers
03:37

Author Spotlight: Impact of Intergenic Interactions on Disease-Identifying Dark Biomarkers

Published on: March 1, 2024

616

Context-Aware Contrastive Representation Learning for Zero-Shot Biomedical Text Classification.

Ratri Mukherjee1, Kishlay Jha1

  • 1Department of Electrical and Computer Engineering University of Iowa, IA, USA.

Proceedings. IEEE International Conference on Bioinformatics and Biomedicine
|March 19, 2025
PubMed
Summary
This summary is machine-generated.

This study introduces a novel zero-shot learning (ZSL) method for biomedical text classification, reducing the need for extensive labeled data. The approach uses context-aware contrastive learning for more accurate classification with only label names.

Keywords:
biomedical multi-label text classificationcontrastive learningzero-shot learning

More Related Videos

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
07:35

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports

Published on: October 13, 2023

1.5K
A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts
07:50

A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts

Published on: September 20, 2018

15.7K

Related Experiment Videos

Last Updated: May 21, 2025

Author Spotlight: Impact of Intergenic Interactions on Disease-Identifying Dark Biomarkers
03:37

Author Spotlight: Impact of Intergenic Interactions on Disease-Identifying Dark Biomarkers

Published on: March 1, 2024

616
A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
07:35

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports

Published on: October 13, 2023

1.5K
A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts
07:50

A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts

Published on: September 20, 2018

15.7K

Area of Science:

  • Biomedical Informatics
  • Natural Language Processing
  • Machine Learning

Background:

  • Biomedical text classification typically requires extensive human-annotated data, which is costly and time-consuming.
  • Existing methods often struggle with data scarcity and high annotation expenses.

Purpose of the Study:

  • To develop a zero-shot learning (ZSL) approach for biomedical text classification that eliminates the need for labeled training data.
  • To leverage label surface names for training and inference, making the process more efficient.

Main Methods:

  • Proposed a novel context-aware contrastive learning technique tailored for ZSL in the biomedical domain.
  • Developed a method to generate semantically meaningful contrastive pairs by exploiting inherent context in biomedical text, unlike random segmentation strategies.

Main Results:

  • The proposed context-aware contrastive learning approach significantly improves zero-shot biomedical text classification accuracy.
  • Experiments on a large biomedical corpus demonstrated the effectiveness and superiority of the new method.

Conclusions:

  • Zero-shot learning, particularly with context-aware contrastive learning, offers a promising solution for biomedical text classification challenges.
  • This method reduces reliance on expensive labeled datasets, enabling broader application in biomedical research.