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Published on: April 11, 2016
Rapid quantification of pullulan in fermentation broth using UV-visible spectroscopy and partial least squares
Nageswar Sahu1, Biswanath Mahanty1, Dibyajyoti Haldar1
1Division of Biotechnology, Karunya Institute of Technology and Sciences, Coimbatore-641114, Tamil Nadu, India. nageswarsahu@karunya.edu.in.
A new method uses partial least squares (PLS) regression to quantify pullulan, a biopolymer, in fermentation broth. This approach offers rapid, non-destructive analysis, overcoming bottlenecks in bioprocess monitoring.
Area of Science:
- Biotechnology
- Analytical Chemistry
- Spectroscopy
Background:
- Traditional exopolysaccharide (EPS) quantification involves lengthy, multi-step sample preparation, hindering real-time bioprocess monitoring.
- Developing non-destructive analytical methods with minimal sample preparation is crucial for efficient bioprocess control.
Purpose of the Study:
- To develop and validate a rapid, non-destructive method for quantifying pullulan in fermentation broth using spectral data.
- To compare different spectral region selection strategies for partial least squares (PLS) regression models.
Main Methods:
- Partial least squares (PLS) regression models were developed using spectral data (204-400 nm) to quantify pullulan.
- Optimization strategies including genetic algorithm, particle swarm optimization, competitive adaptive reweighted sampling, and adaptive bottom-up space exploration were employed for spectral region selection.
- Models were validated using cross-validation, assessing metrics like Root Mean Square Error of Cross-Validation (RMSE_CV) and R-squared (R_CV^2).
Main Results:
- PLS regression models successfully quantified pullulan in both cell-free supernatant and redissolved precipitated forms.
- The full-spectrum model for cell-free supernatant demonstrated high accuracy (RMSE_CV: 0.020 g l^-1, R_CV^2: 0.997).
- Adaptive bottom-up space exploration yielded the best results, achieving low RMSE_CV values with minimal spectral variables, suitable for real-time monitoring.
Conclusions:
- The developed PLS-based spectral method provides a rapid, non-destructive, and accurate alternative for pullulan quantification in fermentation broth.
- This approach significantly reduces sample preparation time, addressing a key bottleneck in bioprocess monitoring.
- The method's adaptability suggests potential for real-time monitoring and control of bioprocesses involving similar biopolymers.
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