Related Experiment Video
Updated: May 21, 2025

Sequencing Small Non-coding RNA from Formalin-fixed Tissues and Serum-derived Exosomes from Castration-resistant Prostate Cancer Patients
Published on: November 19, 2019
Small-molecule RNA therapeutics to target prostate cancer
Duygu Kuzuoglu-Ozturk1, Hao G Nguyen2, Lingru Xue2
1Department of Urology, University of California, San Francisco, San Francisco, CA, USA; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA; Faculty of Engineering and Natural Sciences, Sabanci University, Istanbul, Turkey.
Small molecules targeting RNA structure, like zotatifin, offer a new cancer treatment. This approach effectively repressed tumors and improved survival in castration-resistant prostate cancer models.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- Targeting protein expression via RNA structure modulation is an emerging therapeutic strategy.
- Castration-resistant prostate cancer (CRPC) remains a lethal malignancy with limited treatment options.
Purpose of the Study:
- To investigate the therapeutic potential of targeting RNA structure in CRPC using the small molecule zotatifin.
- To identify key oncogenic targets regulated by zotatifin in CRPC.
Main Methods:
- Utilized zotatifin, a small molecule inhibitor of eukaryotic initiation factor 4A (eIF4A).
- Performed genome-wide transcriptome, translatome, and proteomic analyses.
- Determined the 5' UTR structures of key oncogenic mRNAs.
- Evaluated zotatifin efficacy in patient-derived and xenograft CRPC models.
Main Results:
- Zotatifin repressed tumorigenesis and prolonged survival in vivo when combined with hormone therapy.
- Identified androgen receptor (AR) and hypoxia-inducible factor 1A (HIF1A) as critical translational targets of zotatifin.
- Observed significant structural remodeling of AR and HIF1A mRNAs by zotatifin.
- Zotatifin treatment sensitized tumors to anti-androgen therapy and radiotherapy.
Conclusions:
- Zotatifin demonstrates therapeutic efficacy in CRPC models by targeting AR and HIF1A mRNA translation.
- "Translatome therapy" represents a promising strategy for treating advanced cancers.
- Combined therapeutic approaches enhance treatment sensitivity in CRPC.
Related Concept Videos
siRNA - Small Interfering RNAs
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
Experimental RNAi
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
Targeted Cancer Therapies
There are several types of targeted therapies against...
Types of RNA
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
Small interfering RNAs (siRNA)

