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Mathematical expression exploration with graph representation and generative graph neural network.

Jingyi Liu1, Weijun Li1, Lina Yu1

  • 1AnnLab, Institute of Semiconductors, Chinese Academy of Sciences, Beijing, 100083, China; School of Integrated Circuits & Center of Materials Science and Optoelectronics Engineering, University of Chinese Academy of Sciences, 100049, Beijing, China.

Neural Networks : the Official Journal of the International Neural Network Society
|March 27, 2025
PubMed
Summary
This summary is machine-generated.

This study introduces Graph-based Deep Symbolic Regression (GraphDSR), a novel method using Directed Acyclic Graphs (DAGs) and graph neural networks for mathematical expression discovery. GraphDSR offers a more efficient and intuitive approach compared to traditional tree-based methods.

Keywords:
Directed acyclic graphGraph neural networkReinforcement learningSymbolic regression

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Area of Science:

  • Artificial Intelligence
  • Machine Learning
  • Computational Mathematics

Background:

  • Symbolic Regression (SR) traditionally uses tree representations, which can be redundant.
  • Deep learning has advanced tree-centric SR, but graph-based deep learning for SR is underexplored.
  • Computation graphs offer a more succinct representation of mathematical expressions than trees.

Purpose of the Study:

  • To introduce a novel deep learning approach for Symbolic Regression using Directed Acyclic Graphs (DAGs).
  • To leverage generative graph neural networks for efficient and intuitive mathematical expression discovery.
  • To address the limitations of redundant substructures in tree-based SR methods.

Main Methods:

  • Proposed Graph-based Deep Symbolic Regression (GraphDSR) using DAG representation.
  • Employed generative graph neural networks to incrementally construct DAGs.
  • Utilized vectorized node types and adjacency matrices for graph representation.
  • Incorporated validity checks and domain-agnostic constraints to guide the search process.
  • Optimized constants with SGD and BFGS, and refined the neural network with reinforcement learning.

Main Results:

  • Demonstrated the effectiveness of GraphDSR across 110 diverse benchmarks.
  • Achieved potent results, highlighting the advantages of DAG representation in SR.
  • Showcased the capability of graph neural networks in generating coherent mathematical expressions.

Conclusions:

  • GraphDSR presents a powerful and efficient alternative to traditional tree-based SR methods.
  • The DAG representation combined with generative graph neural networks significantly enhances SR performance.
  • This approach opens new avenues for deep learning applications in symbolic regression and automated scientific discovery.