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Benchmarking Interpretability in Healthcare Using Pattern Discovery and Disentanglement
Pei-Yuan Zhou1, Amane Takeuchi2, Fernando Martinez-Lopez3
1System Design Engineering, University of Waterloo, Waterloo, ON N2L 3G1, Canada.
This study introduces the Pattern Discovery and Disentanglement (PDD) system, an unsupervised AI algorithm that provides interpretable insights from clinical notes. PDD aids healthcare practitioners in understanding AI decisions and assists in disease diagnosis.
Area of Science:
- Artificial Intelligence in Healthcare
- Clinical Informatics
- Machine Learning for Medicine
Background:
- Healthcare systems increasingly use AI, but their 'black box' nature hinders practitioner trust and understanding.
- Interpreting AI decision-making is crucial for safe and effective clinical integration.
Purpose of the Study:
- To benchmark the Pattern Discovery and Disentanglement (PDD) unsupervised learning algorithm for clinical note analysis.
- To evaluate PDD's ability to provide interpretable outputs and aid healthcare decision-making.
- To compare PDD's performance and interpretability against supervised deep learning models and post-hoc interpretability techniques.
Main Methods:
- Utilized the MIMIC-IV dataset, processing clinical notes and ICD-9 codes using Term Frequency-Inverse Document Frequency and Topic Modeling.
- Applied the PDD algorithm for feature discretization, pattern discovery in a disentangled statistical space, and clinical record clustering.
- Benchmarked post-hoc interpretability methods (Feature Permutation, Gradient SHAP, Integrated Gradients) against PDD's global interpretability.
Main Results:
- PDD demonstrated unsupervised clustering performance comparable to supervised deep learning models.
- The PDD algorithm generated an interpretable knowledge base linking clinical data, patterns, and knowledge.
- Post-hoc interpretability techniques showed limitations in clinical diagnosis compared to PDD's global interpretability.
Conclusions:
- PDD offers a viable solution for enhancing AI interpretability in clinical settings.
- The system's global interpretability aids practitioners in understanding AI decision processes.
- PDD effectively clusters diseases, providing valuable insights to support clinical diagnosis.
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