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Calycosin Inhibit PANoptosis and Alleviate Brain Damage: A Bioinformatics and Experimental Verification Approach
Huiyan An1, Chongyu Shao2, Yu He3
1School of Life Science, Zhejiang Chinese Medical University, Hangzhou 310053, Zhejiang, China.
Abstract:
PANoptosis is a newly identified form of cell death that encompasses pyroptosis, apoptosis, and necroptosis. Numerous studies have highlighted the significance of PANoptosis in brain ischemia-reperfusion (I/R) injury. Calycosin, a natural product with diverse biological activities, has demonstrated a significant reduction in neuronal death caused by ischemic brain injury by modulating multiple cell death pathways. In order to investigate the potential mechanisms underlying the neuroprotective role of calycosin in alleviating PANoptosis-induced damage in ischemic stroke therapy, we used mouse hippocampal neuronal cell line HT22 to stimulate ischemia in vitro through Oxygen and Glucose Deprivation/Reperfusion (OGD/R) and established molecular docking to assess the binding affinity of Calycosin with key targets and molecular dynamics simulations (MDS) to study the stability of the ligand-protein complex. The results demonstrate that Calycosin could improve the cell growth of HT22, leading to enhanced cell viability, reduced lactate dehydrogenase leakage, and decreased cell apoptosis after OGD/R. It also regulated the expression of PANoptosis-related genes such as NLRP3, GSDMD, MLKL, and RIPK1 and increased the Bcl-2/Bax ratio, effectively reducing cellular damage and providing protection. Molecular docking and MDS simulations demonstrated strong binding activity and stability between Calycosin and PANoptosis-related targets. Furthermore, Calycosin successfully passed the drug similarity (DS) evaluation and exhibited favorable absorption, distribution, metabolism, excretion, and toxicity (ADMET) properties and biological activity. In conclusion, Calycosin could alleviate ischemic stroke by inhibiting PANoptosis, reducing neuronal inflammation and apoptosis, and improving damage caused by the OGD/R. Thus, it could serve as a potential therapy for ischemic stroke.
Insights
Calycosin, a natural compound, protects brain cells from ischemic stroke by inhibiting PANoptosis, a form of cell death. This study shows calycosin reduces neuronal damage and inflammation, offering potential therapeutic benefits.
Area of Science:
- Neuroscience
- Cell Biology
- Pharmacology
Background:
- PANoptosis, a cell death pathway involving pyroptosis, apoptosis, and necroptosis, is significant in brain ischemia-reperfusion (I/R) injury.
- Calycosin, a natural product, shows neuroprotective effects against ischemic brain injury by modulating cell death pathways.
Purpose of the Study:
- To investigate the mechanisms of calycosin's neuroprotection against PANoptosis in ischemic stroke.
- To evaluate calycosin's efficacy in an in vitro model of ischemic stroke and assess its binding to PANoptosis targets.
Main Methods:
- Used mouse hippocampal neuronal cell line HT22 subjected to Oxygen and Glucose Deprivation/Reperfusion (OGD/R) to model ischemia.
- Employed molecular docking and molecular dynamics simulations (MDS) to analyze calycosin's interaction with key targets.
- Assessed cell viability, lactate dehydrogenase leakage, apoptosis, and gene expression of PANoptosis-related factors (NLRP3, GSDMD, MLKL, RIPK1).
Main Results:
- Calycosin improved HT22 cell viability, reduced cell death markers, and decreased apoptosis post-OGD/R.
- Calycosin modulated the expression of key PANoptosis genes and increased the Bcl-2/Bax ratio, indicating reduced cellular damage.
- Molecular docking and MDS confirmed strong binding affinity and stability between calycosin and PANoptosis targets.
- Calycosin demonstrated favorable drug-likeness (DS evaluation) and ADMET properties.
Conclusions:
- Calycosin alleviates ischemic stroke damage by inhibiting PANoptosis, reducing neuronal inflammation and apoptosis.
- Calycosin exhibits potential as a therapeutic agent for ischemic stroke due to its neuroprotective and anti-PANoptosis effects.

