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Updated: May 16, 2025

Spatio-Temporal Manipulation of Small GTPase Activity at Subcellular Level and on Timescale of Seconds in Living Cells
Published on: March 9, 2012
Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of
Charles W Parry1, Francesca Pellicano1, Alexander W Schüttelkopf1
1Cancer Research Horizons, CRUK Scotland Institute, Garscube Estate, Switchback Road, Glasgow G61 1BD, U.K.
Abstract:
Activating mutations of Ras are one of the most prevalent drivers of cancer and are often associated with poor clinical outcomes. Despite FDA approval for two irreversible inhibitors that target the inactive state of KRasG12C, significant unmet clinical need still exists, and the susceptibility of non-G12C mutants to inactive-state inhibition remains unclear. Here we report the discovery of a novel series of reversible inhibitors that bind in an enlarged version of the switch I-II pocket with nanomolar affinities. Dependent on chemotype these can either preferentially bind to the inactive or active state or bind both with similar affinity. The active-state binders inhibit the Raf interaction for wild-type Ras, and a broad range of oncogenic KRas mutants with nanomolar potency. A subseries of these molecules displays cellular inhibition of Ras-Raf binding, as well as decreased phosphorylation of the downstream protein ERK, demonstrating that potent multivariant Ras inhibitors can be accessed from this novel pocket.
Insights
Researchers developed new reversible inhibitors targeting Ras proteins, offering potential treatments for various cancers beyond KRas G12C mutations. These inhibitors show promise in blocking cancer-driving pathways by targeting both active and inactive Ras states.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- Activating Ras mutations are key cancer drivers, frequently linked to poor prognoses.
- Current KRas G12C inhibitors address a specific mutation, leaving a significant unmet need for other Ras variants.
- The efficacy of targeting non-G12C Ras mutants remains largely unexplored.
Purpose of the Study:
- To discover novel reversible inhibitors targeting a broad spectrum of Ras mutations.
- To investigate inhibitors binding to an enlarged switch I-II pocket in Ras proteins.
- To evaluate the potential of these inhibitors in blocking Ras-driven signaling pathways.
Main Methods:
- Design and synthesis of a novel series of reversible Ras inhibitors.
- Biochemical assays to determine binding affinities and states (active/inactive) for inhibitors.
- Cellular assays to assess inhibition of Ras-Raf interaction and downstream ERK phosphorylation.
Main Results:
- Identified reversible inhibitors with nanomolar affinities for an enlarged Ras switch I-II pocket.
- Developed chemotypes that selectively bind inactive Ras, active Ras, or both states.
- Demonstrated that active-state binders inhibit wild-type Ras and multiple oncogenic KRas mutants, blocking Ras-Raf interaction and reducing ERK phosphorylation in cells.
Conclusions:
- A novel class of reversible Ras inhibitors targeting an enlarged pocket has been discovered.
- These inhibitors demonstrate broad activity against various Ras mutants, including non-G12C variants.
- The findings present a promising new strategy for developing multivariant Ras inhibitors to treat diverse cancers.
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