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Updated: May 13, 2025

gP2S, an Information Management System for CryoEM Experiments
Published on: June 10, 2021
PSI/J: A Portable Interface for Submitting, Monitoring, and Managing Jobs
Mihael Hategan-Marandiuc1,2, Andre Merzky3, Nicholson Collier1,2
1University of Chicago, Chicago, IL, USA.
Abstract:
It is generally desirable for high-performance computing (HPC) applications to be portable between HPC systems, for example to make use of more performant hardware, make effective use of allocations, and to co-locate compute jobs with large datasets. Unfortunately, moving scientific applications between HPC systems is challenging for various reasons, most notably that HPC systems have different HPC schedulers. We introduce PSI/J, a job management abstraction API intended to simplify the construction of software components and applications that are portable over various HPC scheduler implementations. We argue that such a system is both necessary and that no viable alternative currently exists. We analyze similar notable APIs and attempt to determine the factors that influenced their evolution and adoption by the HPC community. We base the design of PSI/J on that analysis. We describe how PSI/J has been integrated in three workflow systems and one application, and also show via experiments that PSI/J imposes minimal overhead.
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