Related Experiment Video
Updated: May 10, 2025

Isolating Free Carbenes, their Mixed Dimers and Organic Radicals
Published on: April 19, 2019
Using LDI-MS to Explore Amide Coupling Reactions with Carboxylate Terminated N-Heterocyclic Carbene Monolayers
Lilian Chinenye Ekowo1, Nathaniel L Dominique1, Gurkiran Kaur2
1Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States.
Abstract:
N-Heterocyclic carbene (NHC) monolayers on gold display great promise as a platform for biotechnology, which requires biomolecule immobilization to NHC surfaces. The most popular method to couple biomolecules is an amide linkage between a carboxylic acid functionalized NHC and an amine terminated biomolecule. A well-established carboxylic acid terminated NHC-gold system was used as a model system to explore how steric bulk, ring strain, and functionality of amine substrates impact the success of coupling reactions. Here, we deploy laser desorption/ionization mass spectrometry (LDI-MS) to monitor the amide linkage products of the NHC monolayer with amine substrates. Mass spectrometry provides significant advantages when compared to other methods, as it can quickly screen for the successful amide linkage of biomolecules to the NHC monolayer. While we expected the NHC architecture to display a low coupling efficiency with sterically bulky and high ring strain amine substrates, coupling occurred for a wide range of substrates, illustrating the promise of NHCs for biomolecule immobilization. Then, we investigated whether the NHC could effectively couple a model biomolecule, l-lysine. Surprisingly, no evidence of coupling was observed, which prompted a series of experiments exploring the functional group tolerance of coupling reactions on the NHC surfaces. Our LDI-MS results illustrate that coupling reactions of NHC monolayers are intolerant to bifunctional amines bearing a terminal carboxylic acid and that esterification is necessary for successful coupling of amino acids. These general principles of NHC monolayer reactivity will provide a guide for the future design of NHC based biotechnology applications.
More Related Videos
09:45Accessing Valuable Ligand Supports for Transition Metals: A Modified, Intermediate Scale Preparation of 1,2,3,4,5-Pentamethylcyclopentadiene
Published on: March 20, 2017
07:53Analysis of Complex Molecules and Their Reactions on Surfaces by Means of Cluster-Induced Desorption/Ionization Mass Spectrometry
Published on: March 1, 2020
Related Concept Videos
Preparation of Amides
The DCC-promoted synthesis of amides begins with the protonation of DCC by carboxylic acid. The protonation makes it a better acceptor. Next, the addition of carboxylate to the protonated carbodiimide gives a reactive acylating agent.
Subsequently, the amine acts as a nucleophile that attacks the acylating agent to form a tetrahedral intermediate. In the...
Amines to Amides: Acylation of Amines
Next, the second equivalent of amine serves as a Brønsted base and deprotonates the quaternary...
[4+2] Cycloaddition of Conjugated Dienes: Diels–Alder Reaction
Carboxylic Acids to Methylesters: Alkylation using Diazomethane
Amides to Amines: LiAlH4 Reduction
Amide reduction requires two equivalents of the reducing agent, acting as a source of hydride ions. As shown in the figure, the reaction is initiated with a nucleophilic attack by the hydride ion at the carbonyl carbon to form a tetrahedral intermediate.
Amides to Carboxylic Acids: Hydrolysis
Acid-catalyzed hydrolysis:
Hydrolysis of amides under acidic conditions yields carboxylic acids. Since the reaction occurs slowly, hydrolysis requires the conditions of heat.
The mechanism begins with the protonation of the carbonyl oxygen by the acid catalyst. The protonation makes the amide carbonyl carbon more...