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Related Concept Videos

Bacterial Signaling01:30

Bacterial Signaling

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Bacterial signaling can occur within bacteria (intracellular) or between bacteria (intercellular). At times, a group of bacteria behaves like a community. To achieve this, they engage in quorum sensing, the perception of higher cell density that causes changes in gene expression. Quorum sensing involves both extracellular and intracellular signaling. The signaling cascade starts with a molecule called an autoinducer (AI). Individual bacteria produce AIs that move out of the bacterial cell...
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Related Experiment Video

Updated: May 10, 2025

A Hydroponic Co-cultivation System for Simultaneous and Systematic Analysis of Plant/Microbe Molecular Interactions and Signaling
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Targeting Agrobacterium tumefaciens: A Computational Study on Quorum Sensing Inhibition.

Jayanthi Barasarathi1, Kahkashan Perveen2, Faheema Khan2

  • 1Faculty of Health and Life Sciences (FHLS), INTI International University, Nilai, Negeri Sembilan, Malaysia.

Journal of Basic Microbiology
|April 23, 2025
PubMed
Summary
This summary is machine-generated.

Researchers identified N-phenylselenourea as a potent inhibitor of Agrobacterium tumefaciens quorum sensing (QS). This discovery offers a novel strategy to combat crown gall disease and improve plant health by disrupting bacterial communication.

Keywords:
N‐phenylselenoureaTraR proteinmolecular dockingplant microbiometranscriptomics

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Area of Science:

  • Microbiology and Plant Pathology
  • Computational Chemistry
  • Agricultural Science

Background:

  • Crown gall disease, caused by Agrobacterium tumefaciens, leads to substantial agricultural losses via tumor formation.
  • Bacterial quorum sensing (QS) regulates A. tumefaciens virulence and pathogenicity.
  • QS influences plant-microbe interactions, affecting symbiosis and plant health.

Purpose of the Study:

  • To identify novel quorum sensing inhibitors (QSIs) targeting the TraR protein of A. tumefaciens.
  • To evaluate QSIs as a strategy for mitigating crown gall disease.
  • To explore the broader impact of QS disruption on plant-microbe interactions.

Main Methods:

  • Screening of potential QSIs using molecular docking and molecular dynamics (MD) simulations.
  • Analysis of protein-protein interactions and binding affinity to the TraR protein.
  • Gene Ontology (GO) enrichment analysis to assess pathway disruption.

Main Results:

  • N-phenylselenourea identified as a potent QSI with a binding affinity of -8 kcal/mol to TraR.
  • MD simulations confirmed stable binding of N-phenylselenourea within the TraR binding pocket, interacting with key residues Tyr53 and Asp70.
  • GO analysis indicated disruption of critical pathogenic pathways.

Conclusions:

  • QSIs, exemplified by N-phenylselenourea, offer a targeted approach to control A. tumefaciens infections.
  • Disrupting bacterial QS can mitigate crown gall disease and potentially enhance beneficial plant-microbe interactions.
  • This research supports the development of sustainable agricultural practices through QS modulation.