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Published on: August 16, 2017
Information Gain Limit of Biomolecular Computation
Easun Arunachalam1, Milo M Lin2
1University of Texas Southwestern Medical Center, Harvard University, Department of Molecular and Cellular Biology, Cambridge, Massachusetts 02138, USA and Green Center for Systems Biology and Lyda Hill Department of Bioinformatics, Dallas, Texas 75390, USA.
Biomolecular systems use energy to perform computations, altering their functional states. This study reveals how thermodynamic forces enable significant information gain beyond equilibrium, explaining nature's energy-intensive information processing.
Area of Science:
- Biophysics
- Theoretical Biology
- Information Theory
Background:
- Biomolecules exist in various functional states, determined by their configurations.
- Biochemical changes alter the probability distribution of these configurations, enabling computation.
- Cellular computations often involve thermodynamic forces, leading to energy expenditure.
Purpose of the Study:
- To investigate the information-theoretic advantage of energy-intensive biomolecular computations.
- To develop a theoretical framework quantifying the role of thermodynamic forces in information gain.
- To relate energy expenditure to information processing capabilities in biological systems.
Main Methods:
- Developed a theoretical framework to analyze information gain from thermodynamic forces.
- Quantified information gain by changes in probability distributions.
- Derived a general expression linking thermodynamic force to maximum information gain.
Main Results:
- Thermodynamic forces enable information gain beyond equilibrium levels.
- A universal bound relates force to maximum information gain for arbitrary computations.
- Small input variations can lead to exponential output changes.
Conclusions:
- Energy expenditure is crucial for achieving high information processing in biomolecular systems.
- Biological systems can approach theoretical limits of information gain.
- The framework explains the necessity of costly computational paradigms in nature.
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