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Updated: May 12, 2025

Synthesis of Cyclic Polymers and Characterization of Their Diffusive Motion in the Melt State at the Single Molecule Level
Published on: September 26, 2016
Aggregation-diffusion in heterogeneous environments
1School of Mathematical and Physical Sciences, The University of Sheffield, Hounsfield Road, Sheffield, S3 7RH, UK. j.potts@sheffield.ac.uk.
Abstract:
Aggregation-diffusion equations are foundational tools for modelling biological aggregations. Their principal use is to link the collective movement mechanisms of organisms to their emergent space use patterns in a concrete mathematical way. However, most existing studies do not account for the effect of the underlying environment on organism movement. In reality, the environment is often a key determinant of emergent space use patterns, albeit in combination with collective aspects of motion. This work studies aggregation-diffusion equations in a heterogeneous environment in one spatial dimension. Under certain assumptions, it is possible to find exact analytic expressions for the steady-state solutions when diffusion is quadratic. Minimising the associated energy functional across these solutions provides a rapid way of determining the likely emergent space use pattern, which can be verified via numerical simulations. This energy-minimisation procedure is applied to a simple test case, where the environment consists of a single clump of attractive resources. Here, self-attraction and resource-attraction combine to shape the emergent aggregation. Two counter-intuitive findings emerge from these analytic results: (a) a non-monotonic dependence of clump width on the aggregation width, (b) a positive correlation between self-attraction strength and aggregation width when the resource attraction is strong. These are verified through numerical simulations. Overall, the study shows rigorously how environment and collective behaviour combine to shape organism space use, sometimes in counter-intuitive ways.
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