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Automatic segmentation and quantitative analysis of brain CT volume in 2-year-olds using deep learning model.
Fengjun Xi1, Liyun Tu2, Feng Zhou2
1Department of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Frontiers in Neurology
|May 9, 2025
Summary
This study developed an automated deep learning method for segmenting pediatric brain CT scans, creating a normative database for 2-year-old children. The ResU-Net model provides accurate brain volume measurements for clinical research.
Area of Science:
- Neuroimaging
- Artificial Intelligence
- Pediatric Radiology
Background:
- Accurate brain volume quantification in pediatric CT scans is crucial for clinical assessment and research.
- Existing methods for brain segmentation in children can be labor-intensive and may lack standardization.
- Establishing normative reference data for brain development in early childhood is essential.
Purpose of the Study:
- To develop and validate an automated deep learning method for segmenting brain CT images in healthy 2-year-old children.
- To quantify regional brain volumes and establish a normative reference database.
- To compare the performance of the ResU-Net model with different kernel sizes against a standard 3D U-Net.
Main Methods:
- A retrospective study included 1,487 pediatric head CT scans (2-year-olds).
- The ResU-Net deep learning model was trained and validated for brain image segmentation.
- Performance was evaluated using the Dice similarity score; regional volumes were derived and statistically analyzed for sex, hemisphere, and age correlations.
Main Results:
- The ResU-Net model achieved high segmentation accuracy (Dice coefficient of 0.96 on the testing set).
- ResU-Net (3,3,3) outperformed other models, including the baseline 3D U-Net (0.88).
- Significant differences in brain volume by sex and hemisphere were observed, with positive correlations between brain volume and age.
Conclusions:
- Deep learning, specifically the ResU-Net model, is effective for automated brain segmentation in pediatric CT imaging.
- The study provides a reliable reference for normative brain volumes in 2-year-old children.
- These findings establish a benchmark for clinical assessment and research, complementing MRI data and addressing the need for accessible pediatric neuroimaging standards.

