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Updated: May 17, 2025

DNAzyme-dependent Analysis of rRNA 2’-O-Methylation
Published on: September 16, 2019
RsmG methylation of 16S rRNA affects the function of ribosomal protein uS12
Trevor W Bell1, Rowan M Turner1, Amanda M Merryman1,2
1Division of Biology and Biomedical Systems, School of Science and Engineering, University of Missouri-Kansas City, Rm 306 Spencer Hall5007 Rockhill Rd., Kansas City, MO, 64110, USA.
Abstract:
The RsmG methyltransferase modifies G527 in bacterial 16S rRNA and its inactivation confers low level streptomycin resistance. In contrast, high level streptomycin resistance typically requires specific alterations in ribosomal protein uS12 or 16S rRNA. Here, we have asked if rsmG inactivation alters the phenotypes of any of a collection of randomly-generated Escherichia coli uS12 mutants. While several uS12 mutants show moderately increased resistance to streptomycin when rsmG is inactivated (MIC = 10-40 µg/ml), a uS12 R85H/rsmG-inactivated strain uniquely displays very high resistance (MIC > 1,024 µg/ml). Additional genetic selections showed that rsmG null mutations combined with specific alterations in uS12 can generate streptomycin-dependence, or pseudo-dependence, in addition to resistance. Moreover, growth of several of these mutants on high concentrations of streptomycin is conditional on rsmG inactivation. Thus, loss of m7G527 methylation affects the streptomycin phenotypes of distinct uS12 mutants and identifies an additional route to high-level streptomycin resistance in bacteria.
Insights
Inactivating the RsmG methyltransferase in Escherichia coli can lead to high-level streptomycin resistance, particularly when combined with specific mutations in ribosomal protein uS12. This finding reveals a new pathway for bacterial resistance to streptomycin.
Area of Science:
- Bacteriology
- Molecular Biology
- Genetics
Background:
- The RsmG methyltransferase is responsible for modifying G527 in bacterial 16S ribosomal RNA (rRNA).
- Inactivation of RsmG typically confers low-level streptomycin resistance.
- High-level streptomycin resistance usually involves mutations in ribosomal protein uS12 or 16S rRNA.
Purpose of the Study:
- To investigate whether rsmG inactivation affects the streptomycin resistance phenotypes of Escherichia coli uS12 mutants.
- To identify novel genetic combinations conferring high-level streptomycin resistance.
Main Methods:
- Generation of random uS12 mutants in Escherichia coli.
- Inactivation of the rsmG gene.
- Assessment of streptomycin resistance (Minimum Inhibitory Concentration - MIC).
- Genetic selections to identify streptomycin dependence.
Main Results:
- While several uS12 mutants showed moderate streptomycin resistance (MIC 10-40 µg/ml) upon rsmG inactivation, one mutant (uS12 R85H) exhibited very high resistance (MIC >1,024 µg/ml).
- Combined rsmG null mutations and specific uS12 alterations resulted in streptomycin dependence or pseudo-dependence.
- Growth of some uS12 mutants on high streptomycin concentrations was conditional on rsmG inactivation.
Conclusions:
- Loss of m7G527 methylation due to rsmG inactivation significantly impacts streptomycin resistance phenotypes in uS12 mutants.
- This study identifies a novel mechanism for achieving high-level streptomycin resistance in bacteria through combined genetic alterations.
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