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Updated: Jun 14, 2025

Using RNA-sequencing to Detect Novel Splice Variants Related to Drug Resistance in In Vitro Cancer Models
Published on: December 9, 2016
PRMT1 inhibitor MS023 suppresses RNA splicing to sensitize small cell lung cancer to DNA damaging agents
Mansi K Aparnathi1, Sami Ul Haq2, Jonathan St-Germain3
1Radiation Medicine Program, Princess Margaret Cancer Centre, University Health Network, Toronto, ON, Canada; Cancer Biology and Imaging, Princess Margaret Cancer Centre, University Health Network, Toronto, ON, Canada.
Abstract:
Small cell lung cancer (SCLC) is a highly aggressive form of cancer, commonly treated with DNA-damaging therapies such as chemotherapy and radiotherapy. Unfortunately, relapse occurs early and frequently, suggesting that epigenetic mechanisms may play a role in this aggressive behavior. Targeting these mechanisms during initial treatment could potentially enhance anti-cancer effects. This study investigated the combination of DNA-damaging treatments with a panel of Epigenetic Chemical Probes (EpiProbes). Among these, MS023, a PRMT inhibitor, showed the greatest synergy with cisplatin and etoposide across various SCLC cell lines. The cytotoxicity of MS023 was correlated with PRMT1 gene expression and protein levels. BioID analysis revealed that many PRMT1 interactors are involved in mRNA splicing. Mechanistic validation demonstrated that MS023 impaired RNA splicing, increased DNA:RNA hybrids, and caused DNA double-strand breaks (DSBs). When combined with ionizing radiation (IR), MS023 significantly increased DSBs, as indicated by γH2AX foci. Additionally, MS023 enhanced the effects of IR and the PARP inhibitor talazoparib, both in vitro and in vivo. Therefore, targeting PRMT1 in combination with DNA-damaging therapies presents a promising strategy to improve treatment outcomes for SCLC.
Insights
Targeting PRMT1 with MS023 enhances DNA-damaging therapies for small cell lung cancer (SCLC). This combination therapy shows promise in overcoming early relapse and improving treatment outcomes for SCLC patients.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- Small cell lung cancer (SCLC) is an aggressive malignancy with high relapse rates after standard DNA-damaging treatments.
- Epigenetic mechanisms are implicated in SCLC's aggressive behavior and treatment resistance.
- Targeting epigenetic pathways may enhance the efficacy of current SCLC therapies.
Purpose of the Study:
- To investigate the synergistic potential of combining DNA-damaging agents with epigenetic chemical probes (EpiProbes) in SCLC.
- To identify specific epigenetic targets and inhibitors that enhance chemotherapy and radiotherapy effects.
- To elucidate the mechanisms by which epigenetic modulation impacts SCLC response to DNA damage.
Main Methods:
- Screening of EpiProbes in combination with cisplatin and etoposide across diverse SCLC cell lines.
- Assessment of cytotoxicity, PRMT1 expression, and protein levels.
- BioID analysis to identify PRMT1 interactors.
- Mechanistic studies involving RNA splicing, DNA:RNA hybrid formation, and DNA double-strand breaks (DSBs) assessment (γH2AX foci).
- In vitro and in vivo evaluation of combination therapy with ionizing radiation (IR) and talazoparib.
Main Results:
- The PRMT inhibitor MS023 demonstrated significant synergy with cisplatin and etoposide in SCLC cells.
- MS023 cytotoxicity correlated with PRMT1 expression.
- PRMT1 interactors are predominantly involved in mRNA splicing.
- MS023 treatment led to impaired RNA splicing, increased DNA:RNA hybrids, and induced DSBs.
- Combination of MS023 with IR or talazoparib enhanced anti-cancer effects both in vitro and in vivo.
Conclusions:
- Targeting PRMT1 with MS023 represents a potent strategy to enhance DNA-damaging therapies for SCLC.
- The combination therapy mechanism involves impaired RNA splicing and increased DNA damage.
- This approach holds promise for improving treatment outcomes and overcoming relapse in SCLC.
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