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Oncogenic function of growth arrest-specific transcript 5 by competing with miR-423-3p to regulate SMARCA4 in
Sang Yean Kim1,2,3, Jin Woong Ha1,2,4, Min Jeong Na1,2,3
1Department of Pathology, College of Medicine, The Catholic University of Korea, Seocho-gu, Seoul, Republic of Korea.
Abstract:
Long noncoding RNA growth arrest-specific transcript 5 (GAS5) has been identified as a tumor suppressor due to its downregulation in several cancers. However, our comprehensive analyses revealed aberrant overexpression of GAS5 in various cancers, with a direct association with SMARCA4 in hepatocellular carcinoma (HCC). Differential expression analyses were conducted using publicly available transcriptome datasets. Functional studies of GAS5 and its downstream targets in HCC were performed via small interfering RNA-mediated knockdown in various HCC cell lines, in vivo xenograft mouse models and spontaneous liver cancer models in Ras-transgenic mice. Here we discover that METTL3-mediated N6-methyladenosine modification promoted IGF2BP2 binding, stabilizing GAS5 in HCC. GAS5 expression was significantly upregulated in large cohort of patients with solid cancer, including HCC. Targeted disruption of GAS5 resulted in notable inhibition of growth and proliferation in HCC cells. Further analyses demonstrated that GAS5 enhanced in vitro tumorigenesis and metastatic potential of HCC cells. MicroRNA target prediction and functional validation indicated that GAS5 shared a miR-423-3p binding element with SMARCA4 messenger RNA, functioning as a competing endogenous RNA. This interaction was validated in vitro tumorigenesis assays and in vivo models. Moreover, a synergistic effect was observed with vehicle containing a small interfering RNA mixture targeting both GAS5 and SMARCA4 in these animal models. N6-methyladenosine-mediated IGF2BP2 binding stabilizes GAS5, which functions as a competing endogenous RNA for miR-423-3p, thereby enhancing the translation of SMARCA4 messenger RNA. GAS5 acts as a crucial regulator of the oncogenic SMARCA4 in hepatocellular carcinogenesis, presenting a potential therapeutic target for the treatment of liver malignancies.
Insights
Long noncoding RNA GAS5 is overexpressed in cancers, promoting hepatocellular carcinoma (HCC) by stabilizing SMARCA4 via miR-423-3p sponging. Targeting GAS5 inhibits HCC growth, offering a potential therapeutic strategy.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- Long noncoding RNA growth arrest-specific transcript 5 (GAS5) is typically a tumor suppressor, but its role in hepatocellular carcinoma (HCC) is complex.
- Previous studies indicated GAS5 downregulation in cancers, but comprehensive analyses revealed its overexpression in various solid tumors, including HCC.
Purpose of the Study:
- To investigate the aberrant expression and functional role of GAS5 in hepatocellular carcinoma (HCC).
- To elucidate the molecular mechanism underlying GAS5 regulation and its interaction with SMARCA4 in HCC pathogenesis.
Main Methods:
- Differential gene expression analysis using public transcriptome datasets.
- Functional studies involving small interfering RNA (siRNA)-mediated knockdown of GAS5 in HCC cell lines and in vivo mouse models.
- Investigation of N6-methyladenosine (m6A) modification, RNA-binding protein interactions (IGF2BP2), and microRNA (miRNA) sponging (miR-423-3p).
Main Results:
- GAS5 was significantly overexpressed in a large cohort of solid cancers, including HCC, and associated with SMARCA4.
- GAS5 knockdown inhibited HCC cell growth, proliferation, in vitro tumorigenesis, and metastatic potential.
- GAS5 acts as a competing endogenous RNA (ceRNA) for miR-423-3p, enhancing SMARCA4 translation, a mechanism stabilized by METTL3-mediated m6A modification and IGF2BP2 binding.
Conclusions:
- GAS5 functions as an oncogene in hepatocellular carcinogenesis by promoting SMARCA4 translation.
- The m6A-IGF2BP2-GAS5 axis stabilizes GAS5, which then competitively binds miR-423-3p, upregulating SMARCA4.
- GAS5 represents a potential therapeutic target for liver malignancies.
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